Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM1BQ8NB78 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.77■□□□□ 0.76
KDM1BQ8NB78 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 FAM210CP-201ENST00000445714 574 ntBASIC19.77■□□□□ 0.76
KDM1BQ8NB78 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 AC145285.6-201ENST00000604632 637 ntBASIC19.77■□□□□ 0.76
KDM1BQ8NB78 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM1BQ8NB78 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.77■□□□□ 0.75
KDM1BQ8NB78 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
KDM1BQ8NB78 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 AL158211.5-201ENST00000623583 2518 ntBASIC19.76■□□□□ 0.75
KDM1BQ8NB78 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 AC116562.4-201ENST00000641316 2276 ntBASIC19.76■□□□□ 0.75
KDM1BQ8NB78 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 MIR1238-201ENST00000408483 83 ntBASIC19.76■□□□□ 0.75
KDM1BQ8NB78 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 AC130371.2-201ENST00000619443 611 ntBASIC19.76■□□□□ 0.75
KDM1BQ8NB78 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KDM1BQ8NB78 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 AC011506.1-201ENST00000474329 610 ntBASIC19.75■□□□□ 0.75
KDM1BQ8NB78 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KDM1BQ8NB78 AL691432.2-201ENST00000607222 2038 ntBASIC19.75■□□□□ 0.75
KDM1BQ8NB78 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM1BQ8NB78 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 RNF165-205ENST00000588679 2904 ntBASIC19.73■□□□□ 0.75
KDM1BQ8NB78 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KDM1BQ8NB78 AC004951.3-201ENST00000418645 1148 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms