Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 DUSP5P2-201ENST00000426873 1033 ntBASIC16.03■□□□□ 0.16
COMMD1Q8N668 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 MYC-209ENST00000641252 345 ntBASIC16.03■□□□□ 0.16
COMMD1Q8N668 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 AP000997.3-201ENST00000623333 2250 ntBASIC16.03■□□□□ 0.16
COMMD1Q8N668 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD1Q8N668 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD1Q8N668 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD1Q8N668 PCDHB18P-201ENST00000524813 2368 ntBASIC16.02■□□□□ 0.16
COMMD1Q8N668 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.02■□□□□ 0.16
COMMD1Q8N668 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD1Q8N668 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD1Q8N668 AC135050.7-201ENST00000624508 2218 ntBASIC16.02■□□□□ 0.16
COMMD1Q8N668 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.02■□□□□ 0.16
COMMD1Q8N668 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD1Q8N668 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD1Q8N668 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.02■□□□□ 0.15
COMMD1Q8N668 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
COMMD1Q8N668 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
COMMD1Q8N668 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
COMMD1Q8N668 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.02■□□□□ 0.15
COMMD1Q8N668 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 AC087633.2-202ENST00000565166 1439 ntBASIC16.02■□□□□ 0.15
COMMD1Q8N668 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD1Q8N668 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
COMMD1Q8N668 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 NOC2LP1-202ENST00000452600 2235 ntBASIC16.01■□□□□ 0.15
COMMD1Q8N668 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD1Q8N668 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD1Q8N668 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD1Q8N668 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD1Q8N668 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16■□□□□ 0.15
COMMD1Q8N668 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16■□□□□ 0.15
COMMD1Q8N668 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms