Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 AL353807.1-201ENST00000427475 662 ntBASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC33Q8N5R6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 RCN1P1-201ENST00000400413 996 ntBASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 AC012306.2-201ENST00000609350 630 ntBASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC33Q8N5R6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 MMP23A-201ENST00000234610 1017 ntBASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 AC073195.1-201ENST00000607241 877 ntBASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC33Q8N5R6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
CCDC33Q8N5R6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC33Q8N5R6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC33Q8N5R6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CCDC33Q8N5R6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC33Q8N5R6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC33Q8N5R6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 AC116351.2-201ENST00000606540 1585 ntBASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 AP001271.2-201ENST00000624018 1556 ntBASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 AP002982.1-201ENST00000492365 877 ntBASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 AC004264.1-201ENST00000608354 794 ntBASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms