Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 AC005332.8-201ENST00000622750 2735 ntBASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 BCL2-203ENST00000589955 5011 ntBASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 AC120498.9-201ENST00000339021 3867 ntBASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01561Q8N1V8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 KRT17P1-201ENST00000399211 1546 ntBASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01561Q8N1V8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 AC005829.2-201ENST00000571422 1056 ntBASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 IRX1P1-201ENST00000438849 1838 ntBASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01561Q8N1V8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 KRT8P8-201ENST00000434750 1448 ntBASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01561Q8N1V8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms