Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD2Q8IV50 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 AC245052.3-201ENST00000450182 901 ntBASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 AC024257.2-201ENST00000549699 147 ntBASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 AC126763.1-201ENST00000552015 2118 ntBASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 AC008764.7-201ENST00000593779 1081 ntBASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 AC073592.3-201ENST00000625118 1834 ntBASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD2Q8IV50 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD2Q8IV50 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 MIR572-201ENST00000384983 95 ntBASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD2Q8IV50 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
LYSMD2Q8IV50 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LYSMD2Q8IV50 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.96■□□□□ 0.3
LYSMD2Q8IV50 KRT16P2-201ENST00000414673 1423 ntBASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms