Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 BX323043.1-201ENST00000641006 1765 ntBASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 AC018553.1-201ENST00000616682 1458 ntBASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 Z82202.1-201ENST00000623446 1880 ntBASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MRPL55Q7Z7F7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 AC116351.2-201ENST00000606540 1585 ntBASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 HTR7P1-202ENST00000624664 4411 ntBASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 SLC29A4P1-201ENST00000398760 971 ntBASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 AL121832.2-201ENST00000610979 668 ntBASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 AL050303.2-201ENST00000619798 666 ntBASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL55Q7Z7F7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 AC073210.2-201ENST00000430369 194 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms