Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASC4Q6P4E1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.71■□□□□ 0.75
CASC4Q6P4E1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASC4Q6P4E1 LINC01465-201ENST00000408887 1940 ntBASIC19.7■□□□□ 0.74
CASC4Q6P4E1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASC4Q6P4E1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.69■□□□□ 0.74
CASC4Q6P4E1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CASC4Q6P4E1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 HLA-B-256ENST00000639848 1089 ntBASIC19.68■□□□□ 0.74
CASC4Q6P4E1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CASC4Q6P4E1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CASC4Q6P4E1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms