Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 BID-214ENST00000617586 542 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SH2D4BQ5SQS7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
SH2D4BQ5SQS7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SH2D4BQ5SQS7 AL138781.2-201ENST00000617896 1843 ntBASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 PKD1P1-201ENST00000458669 6805 ntBASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 AC006015.1-201ENST00000429970 570 ntBASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 AC023632.3-201ENST00000521633 145 ntBASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 AC008694.1-202ENST00000636953 945 ntBASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D4BQ5SQS7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 C2orf69P4-201ENST00000565394 541 ntBASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 AL589743.5-201ENST00000616611 1050 ntBASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D4BQ5SQS7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
SH2D4BQ5SQS7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D4BQ5SQS7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms