Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 HOMER2P1-201ENST00000455653 964 ntBASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 AL023803.3-201ENST00000615559 522 ntBASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 AC116407.4-201ENST00000623319 1061 ntBASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 AL031432.5-201ENST00000641059 760 ntBASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.7■□□□□ 0.9
CTC1Q2NKJ3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 AC004951.3-201ENST00000418645 1148 ntBASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 AC093458.2-201ENST00000623150 629 ntBASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.69■□□□□ 0.9
CTC1Q2NKJ3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 CLEC4GP1-201ENST00000596555 870 ntBASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.68■□□□□ 0.9
CTC1Q2NKJ3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 AC005332.1-201ENST00000577698 1310 ntBASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
CTC1Q2NKJ3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTC1Q2NKJ3 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms