Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDH17Q12864 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH17Q12864 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CDH17Q12864 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH17Q12864 NBPF21P-201ENST00000425093 1451 ntBASIC19.54■□□□□ 0.72
CDH17Q12864 SDHAP1-207ENST00000440850 2000 ntBASIC19.54■□□□□ 0.72
CDH17Q12864 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.54■□□□□ 0.72
CDH17Q12864 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDH17Q12864 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH17Q12864 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.54■□□□□ 0.72
CDH17Q12864 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CDH17Q12864 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH17Q12864 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH17Q12864 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH17Q12864 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH17Q12864 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CDH17Q12864 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH17Q12864 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH17Q12864 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDH17Q12864 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH17Q12864 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.53■□□□□ 0.72
CDH17Q12864 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
CDH17Q12864 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH17Q12864 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH17Q12864 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDH17Q12864 TNXA-203ENST00000507684 2038 ntBASIC19.52■□□□□ 0.72
CDH17Q12864 AC120498.9-201ENST00000339021 3867 ntBASIC19.52■□□□□ 0.72
CDH17Q12864 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDH17Q12864 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CDH17Q12864 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.52■□□□□ 0.72
CDH17Q12864 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 MTDHP1-201ENST00000605323 784 ntBASIC19.52■□□□□ 0.72
CDH17Q12864 AC004264.1-201ENST00000608354 794 ntBASIC19.52■□□□□ 0.72
CDH17Q12864 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.52■□□□□ 0.72
CDH17Q12864 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH17Q12864 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH17Q12864 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH17Q12864 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CDH17Q12864 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDH17Q12864 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDH17Q12864 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH17Q12864 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH17Q12864 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH17Q12864 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH17Q12864 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH17Q12864 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH17Q12864 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms