Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CDK3Q00526 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK3Q00526 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDK3Q00526 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDK3Q00526 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CDK3Q00526 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDK3Q00526 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK3Q00526 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.06■□□□□ 0.64
CDK3Q00526 NAPSB-206ENST00000562112 1266 ntBASIC19.06■□□□□ 0.64
CDK3Q00526 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.06■□□□□ 0.64
CDK3Q00526 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CDK3Q00526 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.06■□□□□ 0.64
CDK3Q00526 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDK3Q00526 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDK3Q00526 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CDK3Q00526 AC096733.2-201ENST00000609937 1394 ntBASIC19.06■□□□□ 0.64
CDK3Q00526 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDK3Q00526 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.05■□□□□ 0.64
CDK3Q00526 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK3Q00526 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDK3Q00526 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDK3Q00526 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.05■□□□□ 0.64
CDK3Q00526 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK3Q00526 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.05■□□□□ 0.64
CDK3Q00526 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.05■□□□□ 0.64
CDK3Q00526 MFAP1P1-201ENST00000442257 1255 ntBASIC19.05■□□□□ 0.64
CDK3Q00526 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDK3Q00526 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK3Q00526 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK3Q00526 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CDK3Q00526 AC010947.1-201ENST00000623454 693 ntBASIC19.05■□□□□ 0.64
CDK3Q00526 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK3Q00526 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK3Q00526 TREX1-205ENST00000625293 1783 ntBASIC19.05■□□□□ 0.64
CDK3Q00526 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CDK3Q00526 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDK3Q00526 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK3Q00526 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.05■□□□□ 0.64
CDK3Q00526 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
CDK3Q00526 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.05■□□□□ 0.64
CDK3Q00526 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
CDK3Q00526 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDK3Q00526 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDK3Q00526 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK3Q00526 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CDK3Q00526 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK3Q00526 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK3Q00526 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK3Q00526 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.04■□□□□ 0.64
CDK3Q00526 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK3Q00526 AC145285.6-201ENST00000604632 637 ntBASIC19.04■□□□□ 0.64
CDK3Q00526 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK3Q00526 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.04■□□□□ 0.64
CDK3Q00526 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.04■□□□□ 0.64
CDK3Q00526 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDK3Q00526 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK3Q00526 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK3Q00526 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK3Q00526 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK3Q00526 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CDK3Q00526 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK3Q00526 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK3Q00526 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK3Q00526 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.03■□□□□ 0.64
CDK3Q00526 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK3Q00526 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK3Q00526 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK3Q00526 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.03■□□□□ 0.64
CDK3Q00526 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.03■□□□□ 0.64
CDK3Q00526 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDK3Q00526 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms