Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.49■□□□□ 0.71
PRAMEP78395 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.48■□□□□ 0.71
PRAMEP78395 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.48■□□□□ 0.71
PRAMEP78395 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.48■□□□□ 0.71
PRAMEP78395 AC026366.1-201ENST00000488803 879 ntBASIC19.48■□□□□ 0.71
PRAMEP78395 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.48■□□□□ 0.71
PRAMEP78395 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.48■□□□□ 0.71
PRAMEP78395 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PRAMEP78395 KRT8P8-201ENST00000434750 1448 ntBASIC19.48■□□□□ 0.71
PRAMEP78395 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PRAMEP78395 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRAMEP78395 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.47■□□□□ 0.71
PRAMEP78395 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PRAMEP78395 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.47■□□□□ 0.71
PRAMEP78395 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 TUBB8P6-201ENST00000436895 1288 ntBASIC19.47■□□□□ 0.71
PRAMEP78395 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.47■□□□□ 0.71
PRAMEP78395 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.47■□□□□ 0.71
PRAMEP78395 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.47■□□□□ 0.71
PRAMEP78395 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.47■□□□□ 0.71
PRAMEP78395 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PRAMEP78395 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.47■□□□□ 0.71
PRAMEP78395 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRAMEP78395 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PRAMEP78395 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PRAMEP78395 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PRAMEP78395 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PRAMEP78395 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.46■□□□□ 0.71
PRAMEP78395 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 KRT18P16-201ENST00000510337 1294 ntBASIC19.46■□□□□ 0.71
PRAMEP78395 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.46■□□□□ 0.71
PRAMEP78395 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.46■□□□□ 0.71
PRAMEP78395 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.46■□□□□ 0.71
PRAMEP78395 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PRAMEP78395 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PRAMEP78395 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.46■□□□□ 0.71
PRAMEP78395 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEP78395 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.46■□□□□ 0.71
PRAMEP78395 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 ZNF815P-204ENST00000434898 1737 ntBASIC19.45■□□□□ 0.7
PRAMEP78395 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.45■□□□□ 0.7
PRAMEP78395 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
PRAMEP78395 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.45■□□□□ 0.7
PRAMEP78395 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.45■□□□□ 0.7
PRAMEP78395 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.45■□□□□ 0.7
PRAMEP78395 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PRAMEP78395 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.45■□□□□ 0.7
PRAMEP78395 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.45■□□□□ 0.7
PRAMEP78395 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.45■□□□□ 0.7
PRAMEP78395 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PRAMEP78395 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms