Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3S2P59780 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AP3S2P59780 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.62■□□□□ 0.25
AP3S2P59780 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3S2P59780 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 AL031963.3-201ENST00000606441 850 ntBASIC16.62■□□□□ 0.25
AP3S2P59780 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3S2P59780 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
AP3S2P59780 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 KRT8P20-201ENST00000423953 1409 ntBASIC16.62■□□□□ 0.25
AP3S2P59780 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3S2P59780 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3S2P59780 MIR572-201ENST00000384983 95 ntBASIC16.61■□□□□ 0.25
AP3S2P59780 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3S2P59780 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3S2P59780 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP3S2P59780 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.61■□□□□ 0.25
AP3S2P59780 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3S2P59780 AC087633.2-202ENST00000565166 1439 ntBASIC16.61■□□□□ 0.25
AP3S2P59780 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3S2P59780 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3S2P59780 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
AP3S2P59780 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S2P59780 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3S2P59780 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 PTBP1P-201ENST00000554374 1601 ntBASIC16.6■□□□□ 0.25
AP3S2P59780 TEX21P-204ENST00000641479 1693 ntBASIC16.6■□□□□ 0.25
AP3S2P59780 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S2P59780 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S2P59780 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S2P59780 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.6■□□□□ 0.25
AP3S2P59780 RARRES2P1-201ENST00000474487 481 ntBASIC16.6■□□□□ 0.25
AP3S2P59780 MIR4466-201ENST00000606121 54 ntBASIC16.6■□□□□ 0.25
AP3S2P59780 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 AL355001.2-201ENST00000620617 1191 ntBASIC16.6■□□□□ 0.25
AP3S2P59780 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
AP3S2P59780 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
AP3S2P59780 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.6■□□□□ 0.25
AP3S2P59780 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP3S2P59780 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3S2P59780 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3S2P59780 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3S2P59780 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3S2P59780 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
AP3S2P59780 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
AP3S2P59780 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP3S2P59780 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.59■□□□□ 0.25
AP3S2P59780 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
AP3S2P59780 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
AP3S2P59780 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms