Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.88■□□□□ 0.45
PER3P56645 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PER3P56645 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PER3P56645 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PER3P56645 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.88■□□□□ 0.45
PER3P56645 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PER3P56645 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.87■□□□□ 0.45
PER3P56645 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.87■□□□□ 0.45
PER3P56645 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.87■□□□□ 0.45
PER3P56645 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.87■□□□□ 0.45
PER3P56645 KRT18P57-201ENST00000443599 1254 ntBASIC17.87■□□□□ 0.45
PER3P56645 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.87■□□□□ 0.45
PER3P56645 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.87■□□□□ 0.45
PER3P56645 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.87■□□□□ 0.45
PER3P56645 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.87■□□□□ 0.45
PER3P56645 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.87■□□□□ 0.45
PER3P56645 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PER3P56645 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.87■□□□□ 0.45
PER3P56645 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.87■□□□□ 0.45
PER3P56645 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.86■□□□□ 0.45
PER3P56645 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 AC087388.1-201ENST00000571370 1112 ntBASIC17.86■□□□□ 0.45
PER3P56645 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 REXO1L10P-201ENST00000615707 1290 ntBASIC17.86■□□□□ 0.45
PER3P56645 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.86■□□□□ 0.45
PER3P56645 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.86■□□□□ 0.45
PER3P56645 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.86■□□□□ 0.45
PER3P56645 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 PLK5-205ENST00000642079 1969 ntBASIC17.86■□□□□ 0.45
PER3P56645 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.86■□□□□ 0.45
PER3P56645 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PER3P56645 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PER3P56645 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PER3P56645 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PER3P56645 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.85■□□□□ 0.45
PER3P56645 AC079598.2-202ENST00000546624 1451 ntBASIC17.85■□□□□ 0.45
PER3P56645 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.85■□□□□ 0.45
PER3P56645 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PER3P56645 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.85■□□□□ 0.45
PER3P56645 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.85■□□□□ 0.45
PER3P56645 FP700111.2-201ENST00000619190 1892 ntBASIC17.85■□□□□ 0.45
PER3P56645 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.84■□□□□ 0.45
PER3P56645 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PER3P56645 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PER3P56645 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PER3P56645 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.84■□□□□ 0.45
PER3P56645 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PER3P56645 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.84■□□□□ 0.45
PER3P56645 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PER3P56645 TERF1P1-201ENST00000311003 1181 ntBASIC17.84■□□□□ 0.45
PER3P56645 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PER3P56645 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PER3P56645 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.84■□□□□ 0.45
PER3P56645 LIN28AP1-201ENST00000429574 405 ntBASIC17.84■□□□□ 0.45
PER3P56645 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms