Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 AC097658.1-201ENST00000475555 843 ntBASIC18.91■□□□□ 0.62
CDH13P55290 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 AC098934.4-201ENST00000564127 592 ntBASIC18.91■□□□□ 0.62
CDH13P55290 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH13P55290 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDH13P55290 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDH13P55290 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH13P55290 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDH13P55290 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDH13P55290 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
CDH13P55290 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH13P55290 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH13P55290 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH13P55290 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH13P55290 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH13P55290 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH13P55290 HLA-B-256ENST00000639848 1089 ntBASIC18.9■□□□□ 0.62
CDH13P55290 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CDH13P55290 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDH13P55290 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH13P55290 SDHAP1-207ENST00000440850 2000 ntBASIC18.9■□□□□ 0.62
CDH13P55290 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDH13P55290 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CDH13P55290 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDH13P55290 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDH13P55290 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH13P55290 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH13P55290 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH13P55290 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH13P55290 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.89■□□□□ 0.61
CDH13P55290 AL138781.1-201ENST00000566567 1274 ntBASIC18.89■□□□□ 0.61
CDH13P55290 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH13P55290 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.89■□□□□ 0.61
CDH13P55290 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDH13P55290 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.89■□□□□ 0.61
CDH13P55290 AP006587.1-201ENST00000534129 1502 ntBASIC18.89■□□□□ 0.61
CDH13P55290 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH13P55290 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.89■□□□□ 0.61
CDH13P55290 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH13P55290 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDH13P55290 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH13P55290 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDH13P55290 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH13P55290 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH13P55290 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDH13P55290 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH13P55290 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH13P55290 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH13P55290 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH13P55290 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CDH13P55290 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH13P55290 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CDH13P55290 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms