Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18■□□□□ 0.47
CDH12P55289 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18■□□□□ 0.47
CDH12P55289 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18■□□□□ 0.47
CDH12P55289 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
CDH12P55289 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDH12P55289 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 AC006970.2-201ENST00000450065 779 ntBASIC18■□□□□ 0.47
CDH12P55289 OR2A1-AS1-201ENST00000462305 773 ntBASIC18■□□□□ 0.47
CDH12P55289 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18■□□□□ 0.47
CDH12P55289 AC083906.2-201ENST00000511578 360 ntBASIC18■□□□□ 0.47
CDH12P55289 AL121832.2-201ENST00000610979 668 ntBASIC18■□□□□ 0.47
CDH12P55289 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CDH12P55289 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18■□□□□ 0.47
CDH12P55289 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 AL049812.1-201ENST00000432563 2267 ntBASIC18■□□□□ 0.47
CDH12P55289 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH12P55289 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDH12P55289 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH12P55289 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH12P55289 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CDH12P55289 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH12P55289 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CDH12P55289 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH12P55289 AC018553.1-201ENST00000616682 1458 ntBASIC17.99■□□□□ 0.47
CDH12P55289 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH12P55289 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CDH12P55289 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH12P55289 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH12P55289 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH12P55289 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH12P55289 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH12P55289 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH12P55289 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH12P55289 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDH12P55289 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH12P55289 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH12P55289 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 TEX21P-204ENST00000641479 1693 ntBASIC17.97■□□□□ 0.47
CDH12P55289 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms