Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.99■□□□□ 0.63
CSNK1EP49674 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CSNK1EP49674 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1EP49674 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.99■□□□□ 0.63
CSNK1EP49674 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1EP49674 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CSNK1EP49674 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.98■□□□□ 0.63
CSNK1EP49674 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CSNK1EP49674 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 PRSS44-201ENST00000515154 1146 ntBASIC18.98■□□□□ 0.63
CSNK1EP49674 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.98■□□□□ 0.63
CSNK1EP49674 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.98■□□□□ 0.63
CSNK1EP49674 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
CSNK1EP49674 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1EP49674 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1EP49674 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSNK1EP49674 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1EP49674 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CSNK1EP49674 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CSNK1EP49674 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CSNK1EP49674 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1EP49674 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 AL691432.2-201ENST00000607222 2038 ntBASIC18.97■□□□□ 0.63
CSNK1EP49674 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1EP49674 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.97■□□□□ 0.63
CSNK1EP49674 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.97■□□□□ 0.63
CSNK1EP49674 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1EP49674 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1EP49674 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1EP49674 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.97■□□□□ 0.63
CSNK1EP49674 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1EP49674 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CSNK1EP49674 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1EP49674 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1EP49674 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1EP49674 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CSNK1EP49674 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1EP49674 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 KRT18P38-201ENST00000449496 1282 ntBASIC18.96■□□□□ 0.63
CSNK1EP49674 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.96■□□□□ 0.63
CSNK1EP49674 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1EP49674 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CSNK1EP49674 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 KRT126P-201ENST00000549467 1181 ntBASIC18.96■□□□□ 0.63
CSNK1EP49674 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1EP49674 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1EP49674 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.96■□□□□ 0.63
CSNK1EP49674 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1EP49674 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1EP49674 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1EP49674 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1EP49674 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1EP49674 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSNK1EP49674 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.95■□□□□ 0.62
CSNK1EP49674 AC073314.1-201ENST00000568729 2216 ntBASIC18.95■□□□□ 0.62
CSNK1EP49674 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSNK1EP49674 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1EP49674 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1EP49674 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1EP49674 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1EP49674 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.95■□□□□ 0.62
CSNK1EP49674 AL121894.2-201ENST00000602977 491 ntBASIC18.95■□□□□ 0.62
CSNK1EP49674 AC008622.2-201ENST00000617006 1229 ntBASIC18.95■□□□□ 0.62
CSNK1EP49674 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.95■□□□□ 0.62
CSNK1EP49674 AL391422.3-201ENST00000603791 2761 ntBASIC18.95■□□□□ 0.62
CSNK1EP49674 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CSNK1EP49674 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1EP49674 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1EP49674 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms