Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.41□□□□□ -0.26
PCP4P48539 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PCP4P48539 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
PCP4P48539 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PCP4P48539 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.4□□□□□ -0.26
PCP4P48539 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.4□□□□□ -0.26
PCP4P48539 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PCP4P48539 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
PCP4P48539 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PCP4P48539 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PCP4P48539 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PCP4P48539 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PCP4P48539 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PCP4P48539 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.4□□□□□ -0.26
PCP4P48539 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PCP4P48539 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
PCP4P48539 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 AC010864.1-201ENST00000609407 1511 ntBASIC13.39□□□□□ -0.27
PCP4P48539 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PCP4P48539 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.39□□□□□ -0.27
PCP4P48539 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PCP4P48539 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.39□□□□□ -0.27
PCP4P48539 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PCP4P48539 PP12613-201ENST00000424958 2230 ntBASIC13.39□□□□□ -0.27
PCP4P48539 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PCP4P48539 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.38□□□□□ -0.27
PCP4P48539 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.38□□□□□ -0.27
PCP4P48539 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 LINC00896-202ENST00000609602 2128 ntBASIC13.38□□□□□ -0.27
PCP4P48539 AC090164.3-201ENST00000610780 2143 ntBASIC13.38□□□□□ -0.27
PCP4P48539 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
PCP4P48539 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms