Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNFP41002 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNFP41002 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNFP41002 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNFP41002 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.44■□□□□ 0.7
CCNFP41002 KRT18P6-201ENST00000555540 1265 ntBASIC19.44■□□□□ 0.7
CCNFP41002 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNFP41002 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNFP41002 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCNFP41002 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNFP41002 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNFP41002 AL049812.1-201ENST00000432563 2267 ntBASIC19.44■□□□□ 0.7
CCNFP41002 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNFP41002 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNFP41002 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCNFP41002 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNFP41002 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCNFP41002 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.43■□□□□ 0.7
CCNFP41002 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNFP41002 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNFP41002 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.43■□□□□ 0.7
CCNFP41002 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.43■□□□□ 0.7
CCNFP41002 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCNFP41002 AC006333.2-201ENST00000607957 2099 ntBASIC19.43■□□□□ 0.7
CCNFP41002 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCNFP41002 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCNFP41002 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.43■□□□□ 0.7
CCNFP41002 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNFP41002 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CCNFP41002 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNFP41002 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNFP41002 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCNFP41002 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNFP41002 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.42■□□□□ 0.7
CCNFP41002 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.42■□□□□ 0.7
CCNFP41002 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.42■□□□□ 0.7
CCNFP41002 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNFP41002 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CCNFP41002 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNFP41002 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCNFP41002 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCNFP41002 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCNFP41002 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CCNFP41002 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNFP41002 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.41■□□□□ 0.7
CCNFP41002 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNFP41002 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.41■□□□□ 0.7
CCNFP41002 RNA5SP413-201ENST00000516373 109 ntBASIC19.41■□□□□ 0.7
CCNFP41002 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.41■□□□□ 0.7
CCNFP41002 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms