Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL13AP40429 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.36□□□□□ -0.27
RPL13AP40429 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL13AP40429 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.35□□□□□ -0.27
RPL13AP40429 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RPL13AP40429 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.35□□□□□ -0.27
RPL13AP40429 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC13.35□□□□□ -0.27
RPL13AP40429 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 AC011298.3-201ENST00000615796 283 ntBASIC13.35□□□□□ -0.27
RPL13AP40429 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
RPL13AP40429 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RPL13AP40429 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
RPL13AP40429 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.35□□□□□ -0.27
RPL13AP40429 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RPL13AP40429 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
RPL13AP40429 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RPL13AP40429 AC018470.1-201ENST00000624790 3129 ntBASIC13.35□□□□□ -0.27
RPL13AP40429 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL13AP40429 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RPL13AP40429 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.34□□□□□ -0.27
RPL13AP40429 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.34□□□□□ -0.27
RPL13AP40429 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RPL13AP40429 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RPL13AP40429 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.34□□□□□ -0.27
RPL13AP40429 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.34□□□□□ -0.27
RPL13AP40429 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.34□□□□□ -0.27
RPL13AP40429 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.34□□□□□ -0.27
RPL13AP40429 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.34□□□□□ -0.27
RPL13AP40429 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RPL13AP40429 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RPL13AP40429 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL13AP40429 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RPL13AP40429 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RPL13AP40429 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RPL13AP40429 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RPL13AP40429 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RPL13AP40429 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RPL13AP40429 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 H19-201ENST00000411754 1788 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL13AP40429 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
RPL13AP40429 TMEM179-206ENST00000616017 1645 ntBASIC13.33□□□□□ -0.28
RPL13AP40429 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
RPL13AP40429 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL13AP40429 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.33□□□□□ -0.28
RPL13AP40429 AC142381.2-201ENST00000566120 298 ntBASIC13.33□□□□□ -0.28
RPL13AP40429 AC099791.2-201ENST00000605725 427 ntBASIC13.33□□□□□ -0.28
RPL13AP40429 AC005837.3-201ENST00000612163 286 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms