Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 PTBP1P-201ENST00000554374 1601 ntBASIC19.43■□□□□ 0.7
CCND1P24385 KRT8P17-201ENST00000453110 1448 ntBASIC19.43■□□□□ 0.7
CCND1P24385 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.43■□□□□ 0.7
CCND1P24385 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.43■□□□□ 0.7
CCND1P24385 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.43■□□□□ 0.7
CCND1P24385 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.43■□□□□ 0.7
CCND1P24385 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.43■□□□□ 0.7
CCND1P24385 AC097658.1-201ENST00000475555 843 ntBASIC19.43■□□□□ 0.7
CCND1P24385 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 AL138781.1-201ENST00000566567 1274 ntBASIC19.43■□□□□ 0.7
CCND1P24385 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 AC133041.1-202ENST00000642053 222 ntBASIC19.43■□□□□ 0.7
CCND1P24385 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.43■□□□□ 0.7
CCND1P24385 AC020763.4-201ENST00000623414 4170 ntBASIC19.43■□□□□ 0.7
CCND1P24385 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCND1P24385 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCND1P24385 AC135050.7-201ENST00000624508 2218 ntBASIC19.43■□□□□ 0.7
CCND1P24385 AL133373.2-201ENST00000623187 2828 ntBASIC19.43■□□□□ 0.7
CCND1P24385 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.42■□□□□ 0.7
CCND1P24385 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCND1P24385 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCND1P24385 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.42■□□□□ 0.7
CCND1P24385 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCND1P24385 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.42■□□□□ 0.7
CCND1P24385 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.42■□□□□ 0.7
CCND1P24385 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
CCND1P24385 AC142086.2-201ENST00000569753 217 ntBASIC19.42■□□□□ 0.7
CCND1P24385 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.42■□□□□ 0.7
CCND1P24385 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.42■□□□□ 0.7
CCND1P24385 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.42■□□□□ 0.7
CCND1P24385 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CCND1P24385 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.42■□□□□ 0.7
CCND1P24385 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCND1P24385 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.42■□□□□ 0.7
CCND1P24385 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.41■□□□□ 0.7
CCND1P24385 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.41■□□□□ 0.7
CCND1P24385 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCND1P24385 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.41■□□□□ 0.7
CCND1P24385 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.41■□□□□ 0.7
CCND1P24385 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.41■□□□□ 0.7
CCND1P24385 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.41■□□□□ 0.7
CCND1P24385 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.41■□□□□ 0.7
CCND1P24385 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.41■□□□□ 0.7
CCND1P24385 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.41■□□□□ 0.7
CCND1P24385 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.41■□□□□ 0.7
CCND1P24385 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.41■□□□□ 0.7
CCND1P24385 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.41■□□□□ 0.7
CCND1P24385 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.41■□□□□ 0.7
CCND1P24385 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCND1P24385 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCND1P24385 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.4■□□□□ 0.7
CCND1P24385 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
CCND1P24385 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCND1P24385 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCND1P24385 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.4■□□□□ 0.7
CCND1P24385 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCND1P24385 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCND1P24385 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCND1P24385 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.4■□□□□ 0.7
CCND1P24385 ID1-201ENST00000376105 1233 ntBASIC19.4■□□□□ 0.7
CCND1P24385 AC069152.1-201ENST00000438030 544 ntBASIC19.4■□□□□ 0.7
CCND1P24385 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.4■□□□□ 0.7
CCND1P24385 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.4■□□□□ 0.7
CCND1P24385 MYC-209ENST00000641252 345 ntBASIC19.4■□□□□ 0.7
CCND1P24385 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCND1P24385 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms