Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAB4AP20338 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB4AP20338 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB4AP20338 AL162727.3-201ENST00000635661 2787 ntBASIC14.8□□□□□ -0.04
RAB4AP20338 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB4AP20338 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB4AP20338 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB4AP20338 SLC47A1P1-202ENST00000449666 945 ntBASIC14.8□□□□□ -0.04
RAB4AP20338 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB4AP20338 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 AL356740.2-201ENST00000601559 647 ntBASIC14.8□□□□□ -0.04
RAB4AP20338 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB4AP20338 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB4AP20338 AC009237.3-201ENST00000393279 1427 ntBASIC14.8□□□□□ -0.04
RAB4AP20338 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
RAB4AP20338 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB4AP20338 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB4AP20338 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB4AP20338 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
RAB4AP20338 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB4AP20338 AC093484.2-201ENST00000580996 2166 ntBASIC14.8□□□□□ -0.04
RAB4AP20338 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAB4AP20338 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB4AP20338 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB4AP20338 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RAB4AP20338 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.79□□□□□ -0.04
RAB4AP20338 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.79□□□□□ -0.04
RAB4AP20338 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB4AP20338 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 AL138724.1-201ENST00000606771 1088 ntBASIC14.79□□□□□ -0.04
RAB4AP20338 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
RAB4AP20338 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 AC008894.3-201ENST00000624324 3103 ntBASIC14.79□□□□□ -0.04
RAB4AP20338 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RAB4AP20338 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB4AP20338 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB4AP20338 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
RAB4AP20338 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms