Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF1BP20333 AC006557.6-201ENST00000623071 864 ntBASIC17.97■□□□□ 0.47
TNFRSF1BP20333 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF1BP20333 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFRSF1BP20333 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF1BP20333 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF1BP20333 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TNFRSF1BP20333 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF1BP20333 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 SDHAP1-207ENST00000440850 2000 ntBASIC17.96■□□□□ 0.47
TNFRSF1BP20333 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.96■□□□□ 0.47
TNFRSF1BP20333 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF1BP20333 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 AL390719.1-204ENST00000412397 1219 ntBASIC17.94■□□□□ 0.46
TNFRSF1BP20333 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 AC005829.2-201ENST00000571422 1056 ntBASIC17.94■□□□□ 0.46
TNFRSF1BP20333 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 AC009113.1-201ENST00000570267 2443 ntBASIC17.94■□□□□ 0.46
TNFRSF1BP20333 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF1BP20333 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TNFRSF1BP20333 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms