Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H1DP16402 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H1DP16402 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H1DP16402 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H1DP16402 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H1DP16402 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H1DP16402 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 AC011767.1-201ENST00000617410 1153 ntBASIC16.41■□□□□ 0.22
HIST1H1DP16402 BID-214ENST00000617586 542 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 AC093525.10-201ENST00000625130 1569 ntBASIC16.41■□□□□ 0.22
HIST1H1DP16402 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 AC026471.1-201ENST00000564629 3026 ntBASIC16.41■□□□□ 0.22
HIST1H1DP16402 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H1DP16402 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H1DP16402 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HIST1H1DP16402 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 Z98044.1-201ENST00000632503 1764 ntBASIC16.4■□□□□ 0.22
HIST1H1DP16402 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H1DP16402 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HIST1H1DP16402 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HIST1H1DP16402 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 WIZP1-201ENST00000531444 2299 ntBASIC16.39■□□□□ 0.21
HIST1H1DP16402 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 AC090164.3-201ENST00000610780 2143 ntBASIC16.39■□□□□ 0.21
HIST1H1DP16402 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H1DP16402 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H1DP16402 AC231657.2-201ENST00000624556 255 ntBASIC16.39■□□□□ 0.21
HIST1H1DP16402 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms