Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
FREM3P0C091 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
FREM3P0C091 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 AC097488.1-201ENST00000507834 756 ntBASIC17.59■□□□□ 0.41
FREM3P0C091 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.59■□□□□ 0.41
FREM3P0C091 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.58■□□□□ 0.41
FREM3P0C091 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FREM3P0C091 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FREM3P0C091 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FREM3P0C091 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
FREM3P0C091 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.58■□□□□ 0.4
FREM3P0C091 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.58■□□□□ 0.4
FREM3P0C091 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.58■□□□□ 0.4
FREM3P0C091 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.58■□□□□ 0.4
FREM3P0C091 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.58■□□□□ 0.4
FREM3P0C091 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.58■□□□□ 0.4
FREM3P0C091 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.58■□□□□ 0.4
FREM3P0C091 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.58■□□□□ 0.4
FREM3P0C091 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FREM3P0C091 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FREM3P0C091 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.57■□□□□ 0.4
FREM3P0C091 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.57■□□□□ 0.4
FREM3P0C091 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.57■□□□□ 0.4
FREM3P0C091 AC009237.14-201ENST00000609975 1594 ntBASIC17.57■□□□□ 0.4
FREM3P0C091 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.57■□□□□ 0.4
FREM3P0C091 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.57■□□□□ 0.4
FREM3P0C091 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.57■□□□□ 0.4
FREM3P0C091 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.57■□□□□ 0.4
FREM3P0C091 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.57■□□□□ 0.4
FREM3P0C091 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.57■□□□□ 0.4
FREM3P0C091 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.57■□□□□ 0.4
FREM3P0C091 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 CYP2D8P-201ENST00000433633 1490 ntBASIC17.57■□□□□ 0.4
FREM3P0C091 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FREM3P0C091 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.57■□□□□ 0.4
FREM3P0C091 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
FREM3P0C091 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
FREM3P0C091 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.56■□□□□ 0.4
FREM3P0C091 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.56■□□□□ 0.4
FREM3P0C091 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.56■□□□□ 0.4
FREM3P0C091 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.56■□□□□ 0.4
FREM3P0C091 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.56■□□□□ 0.4
FREM3P0C091 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FREM3P0C091 HLA-A-209ENST00000638375 975 ntBASIC17.56■□□□□ 0.4
FREM3P0C091 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.56■□□□□ 0.4
FREM3P0C091 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 RCC2P6-201ENST00000526625 1557 ntBASIC17.55■□□□□ 0.4
FREM3P0C091 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.55■□□□□ 0.4
FREM3P0C091 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 Z82202.1-201ENST00000623446 1880 ntBASIC17.55■□□□□ 0.4
FREM3P0C091 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.55■□□□□ 0.4
FREM3P0C091 Z85996.1-201ENST00000494644 937 ntBASIC17.55■□□□□ 0.4
FREM3P0C091 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.55■□□□□ 0.4
FREM3P0C091 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.55■□□□□ 0.4
FREM3P0C091 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FREM3P0C091 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FREM3P0C091 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.55■□□□□ 0.4
FREM3P0C091 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FREM3P0C091 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
FREM3P0C091 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.54■□□□□ 0.4
FREM3P0C091 B3GAT3P1-201ENST00000471720 806 ntBASIC17.54■□□□□ 0.4
FREM3P0C091 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FREM3P0C091 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms