Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.07■□□□□ 0.8
RHOP08100 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOP08100 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RHOP08100 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RHOP08100 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.07■□□□□ 0.8
RHOP08100 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.07■□□□□ 0.8
RHOP08100 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RHOP08100 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.07■□□□□ 0.8
RHOP08100 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.07■□□□□ 0.8
RHOP08100 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.07■□□□□ 0.8
RHOP08100 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RHOP08100 AL121956.5-201ENST00000625261 221 ntBASIC20.07■□□□□ 0.8
RHOP08100 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.07■□□□□ 0.8
RHOP08100 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOP08100 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RHOP08100 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RHOP08100 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOP08100 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOP08100 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.06■□□□□ 0.8
RHOP08100 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.06■□□□□ 0.8
RHOP08100 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 PCED1CP-201ENST00000419887 785 ntBASIC20.06■□□□□ 0.8
RHOP08100 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 FAM86EP-206ENST00000510506 987 ntBASIC20.06■□□□□ 0.8
RHOP08100 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.06■□□□□ 0.8
RHOP08100 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.06■□□□□ 0.8
RHOP08100 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOP08100 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RHOP08100 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOP08100 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOP08100 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RHOP08100 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOP08100 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOP08100 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOP08100 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.05■□□□□ 0.8
RHOP08100 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RHOP08100 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.05■□□□□ 0.8
RHOP08100 AL671277.2-201ENST00000458060 996 ntBASIC20.05■□□□□ 0.8
RHOP08100 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.05■□□□□ 0.8
RHOP08100 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOP08100 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOP08100 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHOP08100 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RHOP08100 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.04■□□□□ 0.8
RHOP08100 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.04■□□□□ 0.8
RHOP08100 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.04■□□□□ 0.8
RHOP08100 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.04■□□□□ 0.8
RHOP08100 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.04■□□□□ 0.8
RHOP08100 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.04■□□□□ 0.8
RHOP08100 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.04■□□□□ 0.8
RHOP08100 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.04■□□□□ 0.8
RHOP08100 AC008622.2-201ENST00000617006 1229 ntBASIC20.04■□□□□ 0.8
RHOP08100 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.04■□□□□ 0.8
RHOP08100 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.04■□□□□ 0.8
RHOP08100 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHOP08100 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RHOP08100 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RHOP08100 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.03■□□□□ 0.8
RHOP08100 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.03■□□□□ 0.8
RHOP08100 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHOP08100 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.03■□□□□ 0.8
RHOP08100 GABARAPL3-202ENST00000624044 1851 ntBASIC20.03■□□□□ 0.8
RHOP08100 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.02■□□□□ 0.8
RHOP08100 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms