Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.8■□□□□ 0.44
THBS1P07996 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
THBS1P07996 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.8■□□□□ 0.44
THBS1P07996 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 AL161938.1-201ENST00000569833 2180 ntBASIC17.8■□□□□ 0.44
THBS1P07996 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.8■□□□□ 0.44
THBS1P07996 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.8■□□□□ 0.44
THBS1P07996 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THBS1P07996 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.79■□□□□ 0.44
THBS1P07996 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.79■□□□□ 0.44
THBS1P07996 AC008403.3-201ENST00000598924 454 ntBASIC17.79■□□□□ 0.44
THBS1P07996 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.79■□□□□ 0.44
THBS1P07996 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.79■□□□□ 0.44
THBS1P07996 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THBS1P07996 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.78■□□□□ 0.44
THBS1P07996 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 PRORSD1P-201ENST00000295112 541 ntBASIC17.78■□□□□ 0.44
THBS1P07996 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
THBS1P07996 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
THBS1P07996 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.78■□□□□ 0.44
THBS1P07996 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.78■□□□□ 0.44
THBS1P07996 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
THBS1P07996 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.78■□□□□ 0.44
THBS1P07996 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THBS1P07996 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.78■□□□□ 0.44
THBS1P07996 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.77■□□□□ 0.44
THBS1P07996 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.77■□□□□ 0.44
THBS1P07996 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
THBS1P07996 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
THBS1P07996 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
THBS1P07996 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.77■□□□□ 0.44
THBS1P07996 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.77■□□□□ 0.44
THBS1P07996 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.77■□□□□ 0.44
THBS1P07996 RNA5SP413-201ENST00000516373 109 ntBASIC17.77■□□□□ 0.44
THBS1P07996 AP003097.1-201ENST00000530657 1135 ntBASIC17.77■□□□□ 0.44
THBS1P07996 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.77■□□□□ 0.44
THBS1P07996 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.77■□□□□ 0.44
THBS1P07996 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.77■□□□□ 0.44
THBS1P07996 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THBS1P07996 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
THBS1P07996 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
THBS1P07996 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms