Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
HMGN2P05204 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGN2P05204 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGN2P05204 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGN2P05204 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGN2P05204 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGN2P05204 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGN2P05204 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGN2P05204 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGN2P05204 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGN2P05204 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGN2P05204 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGN2P05204 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGN2P05204 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGN2P05204 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGN2P05204 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HMGN2P05204 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HMGN2P05204 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGN2P05204 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGN2P05204 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HMGN2P05204 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGN2P05204 LINC01465-201ENST00000408887 1940 ntBASIC18.06■□□□□ 0.48
HMGN2P05204 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGN2P05204 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGN2P05204 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HMGN2P05204 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
HMGN2P05204 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGN2P05204 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGN2P05204 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
HMGN2P05204 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGN2P05204 AC233263.1-201ENST00000578059 224 ntBASIC18.06■□□□□ 0.48
HMGN2P05204 MTDHP1-201ENST00000605323 784 ntBASIC18.06■□□□□ 0.48
HMGN2P05204 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 NBPF21P-201ENST00000425093 1451 ntBASIC18.06■□□□□ 0.48
HMGN2P05204 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGN2P05204 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HMGN2P05204 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGN2P05204 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HMGN2P05204 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 AC141586.3-201ENST00000562166 1838 ntBASIC18.05■□□□□ 0.48
HMGN2P05204 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGN2P05204 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HMGN2P05204 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGN2P05204 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
HMGN2P05204 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGN2P05204 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGN2P05204 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGN2P05204 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HMGN2P05204 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.04■□□□□ 0.48
HMGN2P05204 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HMGN2P05204 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGN2P05204 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGN2P05204 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 ESRRAP1-201ENST00000400596 1257 ntBASIC18.04■□□□□ 0.48
HMGN2P05204 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HMGN2P05204 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 TNXA-203ENST00000507684 2038 ntBASIC18.04■□□□□ 0.48
HMGN2P05204 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
HMGN2P05204 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGN2P05204 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HMGN2P05204 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGN2P05204 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms