Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HMGN1P05114 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGN1P05114 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HMGN1P05114 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGN1P05114 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.51■□□□□ 0.39
HMGN1P05114 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HMGN1P05114 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGN1P05114 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HMGN1P05114 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
HMGN1P05114 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGN1P05114 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGN1P05114 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGN1P05114 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGN1P05114 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HMGN1P05114 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGN1P05114 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGN1P05114 GPX1P1-201ENST00000388829 606 ntBASIC17.5■□□□□ 0.39
HMGN1P05114 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGN1P05114 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGN1P05114 AL390719.1-204ENST00000412397 1219 ntBASIC17.5■□□□□ 0.39
HMGN1P05114 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGN1P05114 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HMGN1P05114 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGN1P05114 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 NEFHP1-201ENST00000412845 2629 ntBASIC17.5■□□□□ 0.39
HMGN1P05114 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGN1P05114 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HMGN1P05114 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HMGN1P05114 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGN1P05114 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HMGN1P05114 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.49■□□□□ 0.39
HMGN1P05114 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGN1P05114 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGN1P05114 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.49■□□□□ 0.39
HMGN1P05114 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGN1P05114 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGN1P05114 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.49■□□□□ 0.39
HMGN1P05114 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.49■□□□□ 0.39
HMGN1P05114 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMGN1P05114 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HMGN1P05114 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HMGN1P05114 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
HMGN1P05114 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGN1P05114 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms