Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LMNAP02545 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.17■□□□□ 0.82
LMNAP02545 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.17■□□□□ 0.82
LMNAP02545 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.17■□□□□ 0.82
LMNAP02545 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.17■□□□□ 0.82
LMNAP02545 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
LMNAP02545 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.17■□□□□ 0.82
LMNAP02545 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.17■□□□□ 0.82
LMNAP02545 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.17■□□□□ 0.82
LMNAP02545 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LMNAP02545 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LMNAP02545 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LMNAP02545 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
LMNAP02545 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LMNAP02545 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.16■□□□□ 0.82
LMNAP02545 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LMNAP02545 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
LMNAP02545 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LMNAP02545 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.16■□□□□ 0.82
LMNAP02545 PGM5P4-201ENST00000421970 445 ntBASIC20.16■□□□□ 0.82
LMNAP02545 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.16■□□□□ 0.82
LMNAP02545 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LMNAP02545 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.16■□□□□ 0.82
LMNAP02545 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LMNAP02545 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LMNAP02545 AC116050.2-201ENST00000612102 1779 ntBASIC20.16■□□□□ 0.82
LMNAP02545 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
LMNAP02545 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.15■□□□□ 0.82
LMNAP02545 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.15■□□□□ 0.82
LMNAP02545 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LMNAP02545 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
LMNAP02545 AK4P3-201ENST00000418260 669 ntBASIC20.15■□□□□ 0.82
LMNAP02545 CRYGFP-201ENST00000418459 633 ntBASIC20.15■□□□□ 0.82
LMNAP02545 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.15■□□□□ 0.82
LMNAP02545 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.15■□□□□ 0.82
LMNAP02545 AC116562.2-201ENST00000507042 360 ntBASIC20.15■□□□□ 0.82
LMNAP02545 AC022616.7-201ENST00000525383 220 ntBASIC20.15■□□□□ 0.82
LMNAP02545 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.15■□□□□ 0.82
LMNAP02545 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LMNAP02545 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LMNAP02545 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.15■□□□□ 0.82
LMNAP02545 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.15■□□□□ 0.82
LMNAP02545 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LMNAP02545 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.15■□□□□ 0.82
LMNAP02545 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.15■□□□□ 0.82
LMNAP02545 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LMNAP02545 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LMNAP02545 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LMNAP02545 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.14■□□□□ 0.81
LMNAP02545 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.14■□□□□ 0.81
LMNAP02545 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
LMNAP02545 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.14■□□□□ 0.81
LMNAP02545 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LMNAP02545 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 AC009947.2-201ENST00000444014 672 ntBASIC20.14■□□□□ 0.81
LMNAP02545 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.14■□□□□ 0.81
LMNAP02545 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.14■□□□□ 0.81
LMNAP02545 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LMNAP02545 AC004264.1-201ENST00000608354 794 ntBASIC20.14■□□□□ 0.81
LMNAP02545 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LMNAP02545 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LMNAP02545 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LMNAP02545 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms