Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 ATP5G1P1-201ENST00000448724 379 ntBASIC21.74■■□□□ 1.07
GGPS1O95749 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
GGPS1O95749 AL590326.2-201ENST00000625139 305 ntBASIC21.74■■□□□ 1.07
GGPS1O95749 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
GGPS1O95749 KRT8P41-201ENST00000533985 1514 ntBASIC21.74■■□□□ 1.07
GGPS1O95749 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.74■■□□□ 1.07
GGPS1O95749 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GGPS1O95749 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.73■■□□□ 1.07
GGPS1O95749 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
GGPS1O95749 AC104076.2-201ENST00000448912 469 ntBASIC21.73■■□□□ 1.07
GGPS1O95749 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
GGPS1O95749 AC116562.4-202ENST00000641738 218 ntBASIC21.73■■□□□ 1.07
GGPS1O95749 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
GGPS1O95749 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GGPS1O95749 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
GGPS1O95749 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.73■■□□□ 1.07
GGPS1O95749 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.73■■□□□ 1.07
GGPS1O95749 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.73■■□□□ 1.07
GGPS1O95749 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.73■■□□□ 1.07
GGPS1O95749 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.72■■□□□ 1.07
GGPS1O95749 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GGPS1O95749 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
GGPS1O95749 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.72■■□□□ 1.07
GGPS1O95749 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.72■■□□□ 1.07
GGPS1O95749 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.72■■□□□ 1.07
GGPS1O95749 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
GGPS1O95749 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
GGPS1O95749 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GGPS1O95749 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.71■■□□□ 1.07
GGPS1O95749 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.71■■□□□ 1.07
GGPS1O95749 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 ARMC10P1-201ENST00000313754 855 ntBASIC21.71■■□□□ 1.07
GGPS1O95749 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.71■■□□□ 1.07
GGPS1O95749 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
GGPS1O95749 SLC25A1P2-201ENST00000430693 912 ntBASIC21.71■■□□□ 1.07
GGPS1O95749 CCR12P-201ENST00000446203 998 ntBASIC21.71■■□□□ 1.07
GGPS1O95749 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.71■■□□□ 1.07
GGPS1O95749 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.71■■□□□ 1.07
GGPS1O95749 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
GGPS1O95749 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
GGPS1O95749 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.71■■□□□ 1.07
GGPS1O95749 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GGPS1O95749 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
GGPS1O95749 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.71■■□□□ 1.07
GGPS1O95749 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
GGPS1O95749 TCF3P1-201ENST00000423021 1937 ntBASIC21.7■■□□□ 1.07
GGPS1O95749 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.7■■□□□ 1.06
GGPS1O95749 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
GGPS1O95749 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
GGPS1O95749 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.7■■□□□ 1.06
GGPS1O95749 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 DUX4L26-201ENST00000489078 1255 ntBASIC21.7■■□□□ 1.06
GGPS1O95749 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GGPS1O95749 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
GGPS1O95749 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.7■■□□□ 1.06
GGPS1O95749 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.7■■□□□ 1.06
GGPS1O95749 AC006011.2-201ENST00000621313 1158 ntBASIC21.7■■□□□ 1.06
GGPS1O95749 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.7■■□□□ 1.06
GGPS1O95749 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
GGPS1O95749 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms