Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AL121829.2-201ENST00000620908 328 ntBASIC17.43■□□□□ 0.38
PTP4A3O75365 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.43■□□□□ 0.38
PTP4A3O75365 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTP4A3O75365 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.43■□□□□ 0.38
PTP4A3O75365 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTP4A3O75365 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AC083880.1-201ENST00000608266 535 ntBASIC17.42■□□□□ 0.38
PTP4A3O75365 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PTP4A3O75365 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTP4A3O75365 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTP4A3O75365 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PTP4A3O75365 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PTP4A3O75365 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTP4A3O75365 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.41■□□□□ 0.38
PTP4A3O75365 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.41■□□□□ 0.38
PTP4A3O75365 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A3O75365 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PTP4A3O75365 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.41■□□□□ 0.38
PTP4A3O75365 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.41■□□□□ 0.38
PTP4A3O75365 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.41■□□□□ 0.38
PTP4A3O75365 AL138781.1-201ENST00000566567 1274 ntBASIC17.41■□□□□ 0.38
PTP4A3O75365 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.41■□□□□ 0.38
PTP4A3O75365 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PTP4A3O75365 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.41■□□□□ 0.38
PTP4A3O75365 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A3O75365 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
PTP4A3O75365 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A3O75365 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PTP4A3O75365 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTP4A3O75365 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTP4A3O75365 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PTP4A3O75365 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.41■□□□□ 0.38
PTP4A3O75365 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
PTP4A3O75365 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.4■□□□□ 0.38
PTP4A3O75365 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A3O75365 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.4■□□□□ 0.38
PTP4A3O75365 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.4■□□□□ 0.38
PTP4A3O75365 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
PTP4A3O75365 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.4■□□□□ 0.38
PTP4A3O75365 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A3O75365 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTP4A3O75365 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms