Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 IRS3P-201ENST00000223076 1006 ntBASIC19.07■□□□□ 0.64
SNX3O60493 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.07■□□□□ 0.64
SNX3O60493 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.07■□□□□ 0.64
SNX3O60493 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.07■□□□□ 0.64
SNX3O60493 AL354811.1-201ENST00000610286 706 ntBASIC19.07■□□□□ 0.64
SNX3O60493 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 PRORSD1P-202ENST00000563365 2154 ntBASIC19.07■□□□□ 0.64
SNX3O60493 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SNX3O60493 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX3O60493 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX3O60493 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SNX3O60493 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SNX3O60493 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SNX3O60493 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX3O60493 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX3O60493 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SNX3O60493 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.06■□□□□ 0.64
SNX3O60493 SLC7A5P1-201ENST00000568957 537 ntBASIC19.06■□□□□ 0.64
SNX3O60493 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX3O60493 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SNX3O60493 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX3O60493 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX3O60493 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
SNX3O60493 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX3O60493 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNX3O60493 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX3O60493 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX3O60493 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX3O60493 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX3O60493 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNX3O60493 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNX3O60493 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.05■□□□□ 0.64
SNX3O60493 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.05■□□□□ 0.64
SNX3O60493 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX3O60493 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 ZNF815P-204ENST00000434898 1737 ntBASIC19.05■□□□□ 0.64
SNX3O60493 ANO7L1-203ENST00000602586 1720 ntBASIC19.05■□□□□ 0.64
SNX3O60493 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX3O60493 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX3O60493 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNX3O60493 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX3O60493 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX3O60493 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
SNX3O60493 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.04■□□□□ 0.64
SNX3O60493 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SNX3O60493 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SNX3O60493 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNX3O60493 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX3O60493 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms