Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.44□□□□□ -0.1
SNAI2O43623 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.44□□□□□ -0.1
SNAI2O43623 AC142381.2-201ENST00000566120 298 ntBASIC14.44□□□□□ -0.1
SNAI2O43623 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SNAI2O43623 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SNAI2O43623 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 FER1L4-210ENST00000615531 5998 ntBASIC14.44□□□□□ -0.1
SNAI2O43623 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.44□□□□□ -0.1
SNAI2O43623 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SNAI2O43623 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.44□□□□□ -0.1
SNAI2O43623 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.44□□□□□ -0.1
SNAI2O43623 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.44□□□□□ -0.1
SNAI2O43623 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNAI2O43623 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.43□□□□□ -0.1
SNAI2O43623 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SNAI2O43623 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SNAI2O43623 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.43□□□□□ -0.1
SNAI2O43623 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SNAI2O43623 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.43□□□□□ -0.1
SNAI2O43623 AC004854.2-201ENST00000608450 1441 ntBASIC14.43□□□□□ -0.1
SNAI2O43623 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 AP000997.3-201ENST00000623333 2250 ntBASIC14.43□□□□□ -0.1
SNAI2O43623 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SNAI2O43623 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SNAI2O43623 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.43□□□□□ -0.1
SNAI2O43623 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.43□□□□□ -0.1
SNAI2O43623 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNAI2O43623 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.43□□□□□ -0.1
SNAI2O43623 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.43□□□□□ -0.1
SNAI2O43623 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SNAI2O43623 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.42□□□□□ -0.1
SNAI2O43623 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.42□□□□□ -0.1
SNAI2O43623 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.42□□□□□ -0.1
SNAI2O43623 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNAI2O43623 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNAI2O43623 NOC2LP1-202ENST00000452600 2235 ntBASIC14.42□□□□□ -0.1
SNAI2O43623 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SNAI2O43623 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.42□□□□□ -0.1
SNAI2O43623 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SNAI2O43623 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SNAI2O43623 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SNAI2O43623 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.42□□□□□ -0.1
SNAI2O43623 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.42□□□□□ -0.1
SNAI2O43623 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SNAI2O43623 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.42□□□□□ -0.1
SNAI2O43623 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNAI2O43623 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SNAI2O43623 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNAI2O43623 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNAI2O43623 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms