Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF13O43567 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF13O43567 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF13O43567 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF13O43567 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF13O43567 HLA-L-209ENST00000420110 1011 ntBASIC17.6■□□□□ 0.41
RNF13O43567 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF13O43567 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.6■□□□□ 0.41
RNF13O43567 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF13O43567 AC142086.2-201ENST00000569753 217 ntBASIC17.6■□□□□ 0.41
RNF13O43567 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RNF13O43567 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RNF13O43567 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF13O43567 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF13O43567 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF13O43567 NEFHP1-201ENST00000412845 2629 ntBASIC17.6■□□□□ 0.41
RNF13O43567 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RNF13O43567 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF13O43567 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RNF13O43567 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF13O43567 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF13O43567 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF13O43567 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.59■□□□□ 0.41
RNF13O43567 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF13O43567 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF13O43567 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF13O43567 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF13O43567 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF13O43567 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF13O43567 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF13O43567 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF13O43567 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF13O43567 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF13O43567 AL032819.2-201ENST00000624543 2162 ntBASIC17.59■□□□□ 0.41
RNF13O43567 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF13O43567 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF13O43567 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF13O43567 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RNF13O43567 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RNF13O43567 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF13O43567 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF13O43567 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF13O43567 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF13O43567 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF13O43567 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF13O43567 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF13O43567 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF13O43567 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF13O43567 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF13O43567 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF13O43567 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF13O43567 SOX15-203ENST00000570788 1093 ntBASIC17.58■□□□□ 0.4
RNF13O43567 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF13O43567 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
RNF13O43567 AL121906.2-201ENST00000621597 723 ntBASIC17.58■□□□□ 0.4
RNF13O43567 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF13O43567 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF13O43567 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF13O43567 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF13O43567 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF13O43567 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF13O43567 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms