Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.2■□□□□ 0.02
PCP4L1A6NKN8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 LINC02199-201ENST00000506655 2702 ntBASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 NORAD-201ENST00000565493 5339 ntBASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.19■□□□□ 0.02
PCP4L1A6NKN8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 LINC00896-202ENST00000609602 2128 ntBASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCP4L1A6NKN8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms