Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TVP23AA6NH52 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TVP23AA6NH52 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
TVP23AA6NH52 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TVP23AA6NH52 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 TSPY6P-201ENST00000448518 926 ntBASIC17.26■□□□□ 0.35
TVP23AA6NH52 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.26■□□□□ 0.35
TVP23AA6NH52 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TVP23AA6NH52 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 TEX21P-204ENST00000641479 1693 ntBASIC17.25■□□□□ 0.35
TVP23AA6NH52 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TVP23AA6NH52 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TVP23AA6NH52 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 ZNF815P-204ENST00000434898 1737 ntBASIC17.24■□□□□ 0.35
TVP23AA6NH52 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 AC092368.3-202ENST00000574180 1591 ntBASIC17.24■□□□□ 0.35
TVP23AA6NH52 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 AL161938.1-201ENST00000569833 2180 ntBASIC17.24■□□□□ 0.35
TVP23AA6NH52 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.24■□□□□ 0.35
TVP23AA6NH52 NCF1B-203ENST00000435988 1254 ntBASIC17.24■□□□□ 0.35
TVP23AA6NH52 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 AL049812.1-201ENST00000432563 2267 ntBASIC17.24■□□□□ 0.35
TVP23AA6NH52 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TVP23AA6NH52 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TVP23AA6NH52 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms