Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM235A6NFC5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 AC018553.1-201ENST00000616682 1458 ntBASIC16.51■□□□□ 0.23
TMEM235A6NFC5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 AC023632.3-201ENST00000521633 145 ntBASIC16.51■□□□□ 0.23
TMEM235A6NFC5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 AC135050.7-201ENST00000624508 2218 ntBASIC16.51■□□□□ 0.23
TMEM235A6NFC5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM235A6NFC5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.5■□□□□ 0.23
TMEM235A6NFC5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM235A6NFC5 AC090164.3-201ENST00000610780 2143 ntBASIC16.49■□□□□ 0.23
TMEM235A6NFC5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms