Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 AC142381.2-201ENST00000566120 298 ntBASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MEIS3P1A6NDR6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 AC090164.3-201ENST00000610780 2143 ntBASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MEIS3P1A6NDR6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 AC016405.3-201ENST00000607710 860 ntBASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.56■□□□□ 0.24
MEIS3P1A6NDR6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 AC141586.3-201ENST00000562166 1838 ntBASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 AL591742.1-201ENST00000604433 565 ntBASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MEIS3P1A6NDR6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms