Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV2A0A0B4J234 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV2A0A0B4J234 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV2A0A0B4J234 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV2A0A0B4J234 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV2A0A0B4J234 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV2A0A0B4J234 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 AC110285.5-201ENST00000611501 352 ntBASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV2A0A0B4J234 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 KRASP1-201ENST00000407852 552 ntBASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 AC124016.1-201ENST00000609552 612 ntBASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV2A0A0B4J234 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms