Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 ZNF304-202ENST00000391705 4313 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRTAP3-3Q9BYR6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC02280-201ENST00000564585 3816 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ARHGEF9-233ENST00000637520 5682 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ABCC11-201ENST00000353782 4463 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC012508.1-201ENST00000564121 4476 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC007938.4-201ENST00000610046 4118 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SVILP1-201ENST00000422642 2676 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RNU4-15P-201ENST00000362613 141 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA73.1-201ENST00000363107 205 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA70I-201ENST00000384544 135 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AL049758.1-201ENST00000423154 397 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 UQCRHP1-204ENST00000424609 274 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 FAM136BP-201ENST00000428729 417 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 USP41-202ENST00000454608 1077 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 PET100-201ENST00000456958 219 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RN7SL148P-201ENST00000467120 279 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RN7SL675P-201ENST00000478498 297 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RPL7AP57-201ENST00000497708 784 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RPL23AP63-201ENST00000498752 471 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MRPS17P9-201ENST00000511924 393 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC097376.1-202ENST00000512815 657 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RNA5SP20-201ENST00000515976 84 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 GOT1L1-202ENST00000518826 497 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC012653.1-201ENST00000558410 931 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC010287.1-201ENST00000566916 357 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC005670.1-201ENST00000572349 395 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC00511-204ENST00000577828 538 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR4442-201ENST00000583412 67 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC021534.1-201ENST00000583980 547 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 DTNA-220ENST00000590831 847 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 IGFL1P1-201ENST00000599950 360 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AL035425.1-201ENST00000608811 551 ntTSL 4 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR6893-201ENST00000613458 69 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 U73479.1-201ENST00000618062 168 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC02504-201ENST00000512241 4949 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 GPR156-203ENST00000464295 4442 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ARHGAP42P4-201ENST00000549782 2934 ntBASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 IFT172-201ENST00000260570 5415 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 ZBTB34-201ENST00000319119 6564 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 CCDC18-201ENST00000343253 4867 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 WDR37-202ENST00000358220 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP3-3Q9BYR6 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP3-3Q9BYR6 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KRTAP3-3Q9BYR6 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KRTAP3-3Q9BYR6 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms