RNA–Protein interactions for RNA: ENST00000358066.8

SEMA6D-204, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-204ENST00000358066 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
SEMA6D-204ENST00000358066 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
SEMA6D-204ENST00000358066 SUPT5HO00267 1087 aaKnown RBP17.76■□□□□ 0.43
SEMA6D-204ENST00000358066 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
SEMA6D-204ENST00000358066 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
SEMA6D-204ENST00000358066 APLP2Q06481 763 aa17.4■□□□□ 0.38
SEMA6D-204ENST00000358066 CCER1Q8TC90 406 aaPredicted RBP17.35■□□□□ 0.37
SEMA6D-204ENST00000358066 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
SEMA6D-204ENST00000358066 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
SEMA6D-204ENST00000358066 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
SEMA6D-204ENST00000358066 MYT1Q01538 1121 aa17.04■□□□□ 0.32
SEMA6D-204ENST00000358066 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
SEMA6D-204ENST00000358066 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
SEMA6D-204ENST00000358066 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
SEMA6D-204ENST00000358066 NEFLP07196 543 aa16.89■□□□□ 0.29
SEMA6D-204ENST00000358066 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
SEMA6D-204ENST00000358066 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
SEMA6D-204ENST00000358066 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.26
SEMA6D-204ENST00000358066 ATP1B4Q9UN42 357 aaPredicted RBP16.68■□□□□ 0.26
SEMA6D-204ENST00000358066 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
SEMA6D-204ENST00000358066 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
SEMA6D-204ENST00000358066 UBTFP17480 764 aaKnown RBP16.39■□□□□ 0.21
SEMA6D-204ENST00000358066 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
SEMA6D-204ENST00000358066 ZNF316A6NFI3 1004 aaPredicted RBP16.23■□□□□ 0.19
SEMA6D-204ENST00000358066 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
SEMA6D-204ENST00000358066 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
SEMA6D-204ENST00000358066 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
SEMA6D-204ENST00000358066 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
SEMA6D-204ENST00000358066 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
SEMA6D-204ENST00000358066 ITGAEP38570 1179 aa16.01■□□□□ 0.15
SEMA6D-204ENST00000358066 HRCP23327 699 aa16■□□□□ 0.15
SEMA6D-204ENST00000358066 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
SEMA6D-204ENST00000358066 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
SEMA6D-204ENST00000358066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
SEMA6D-204ENST00000358066 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
SEMA6D-204ENST00000358066 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
SEMA6D-204ENST00000358066 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
SEMA6D-204ENST00000358066 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
SEMA6D-204ENST00000358066 CDK11AQ9UQ88 783 aaPredicted RBP15.7■□□□□ 0.1
SEMA6D-204ENST00000358066 BCANQ96GW7 911 aa15.68■□□□□ 0.1
SEMA6D-204ENST00000358066 CANXP27824 592 aaKnown RBP15.6■□□□□ 0.09
SEMA6D-204ENST00000358066 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
SEMA6D-204ENST00000358066 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
SEMA6D-204ENST00000358066 ANP32CO43423 234 aa15.56■□□□□ 0.08
SEMA6D-204ENST00000358066 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
SEMA6D-204ENST00000358066 NEUROD1Q13562 356 aa15.53■□□□□ 0.08
SEMA6D-204ENST00000358066 GTF3C3Q9Y5Q9 886 aa15.53■□□□□ 0.08
SEMA6D-204ENST00000358066 SLC24A1O60721 1099 aa15.51■□□□□ 0.07
SEMA6D-204ENST00000358066 ANP32AP39687 249 aaKnown RBP15.5■□□□□ 0.07
SEMA6D-204ENST00000358066 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
SEMA6D-204ENST00000358066 ANP32BQ92688 251 aaKnown RBP15.46■□□□□ 0.06
SEMA6D-204ENST00000358066 ZNF326Q5BKZ1 582 aaKnown RBP15.44■□□□□ 0.06
SEMA6D-204ENST00000358066 NEFMP07197 916 aa15.42■□□□□ 0.06
SEMA6D-204ENST00000358066 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
SEMA6D-204ENST00000358066 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
SEMA6D-204ENST00000358066 GLIPR1L2Q4G1C9 344 aa15.38■□□□□ 0.05
SEMA6D-204ENST00000358066 HSP90AA1P07900 732 aaKnown RBP15.28■□□□□ 0.04
SEMA6D-204ENST00000358066 UPF2Q9HAU5 1272 aaKnown RBP15.22■□□□□ 0.03
SEMA6D-204ENST00000358066 ACIN1Q9UKV3 1341 aaKnown RBP15.2■□□□□ 0.02
SEMA6D-204ENST00000358066 FKBP8Q14318 412 aa15.11■□□□□ 0.01
SEMA6D-204ENST00000358066 CDK11BP21127 795 aaKnown RBP15.07■□□□□ 0
SEMA6D-204ENST00000358066 NBR1Q14596 966 aa15.06■□□□□ 0
SEMA6D-204ENST00000358066 ARXQ96QS3 562 aa15.04■□□□□ -0
SEMA6D-204ENST00000358066 FBLN2P98095 1184 aa15.01□□□□□ -0.01
SEMA6D-204ENST00000358066 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.99□□□□□ -0.01
SEMA6D-204ENST00000358066 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
SEMA6D-204ENST00000358066 HNRNPUQ00839 825 aaKnown RBP eCLIP14.96□□□□□ -0.02
SEMA6D-204ENST00000358066 FAM9BQ8IZU0 186 aa14.94□□□□□ -0.02
SEMA6D-204ENST00000358066 CCDC136Q96JN2 1154 aa14.93□□□□□ -0.02
SEMA6D-204ENST00000358066 ARID3CA6NKF2 412 aa14.93□□□□□ -0.02
SEMA6D-204ENST00000358066 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
SEMA6D-204ENST00000358066 TONSLQ96HA7 1378 aa14.92□□□□□ -0.02
SEMA6D-204ENST00000358066 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
SEMA6D-204ENST00000358066 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
SEMA6D-204ENST00000358066 NCLP19338 710 aaKnown RBP14.89□□□□□ -0.03
SEMA6D-204ENST00000358066 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
SEMA6D-204ENST00000358066 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
SEMA6D-204ENST00000358066 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
SEMA6D-204ENST00000358066 TNNT2P45379 298 aaPredicted RBP14.88□□□□□ -0.03
SEMA6D-204ENST00000358066 DDRGK1Q96HY6 314 aa14.87□□□□□ -0.03
SEMA6D-204ENST00000358066 SALL2Q9Y467 1007 aaPredicted RBP14.87□□□□□ -0.03
SEMA6D-204ENST00000358066 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
SEMA6D-204ENST00000358066 BECN1Q14457 450 aa14.84□□□□□ -0.03
SEMA6D-204ENST00000358066 TMC1Q8TDI8 760 aa14.81□□□□□ -0.04
SEMA6D-204ENST00000358066 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
SEMA6D-204ENST00000358066 GOLGA6L22H0YM25 854 aa14.79□□□□□ -0.04
SEMA6D-204ENST00000358066 DDX10Q13206 875 aaKnown RBP14.79□□□□□ -0.04
SEMA6D-204ENST00000358066 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
SEMA6D-204ENST00000358066 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
SEMA6D-204ENST00000358066 PTMAP06454 111 aaKnown RBP14.76□□□□□ -0.05
SEMA6D-204ENST00000358066 ZRSR1Q15695 479 aaKnown RBP14.74□□□□□ -0.05
SEMA6D-204ENST00000358066 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
SEMA6D-204ENST00000358066 DNTTIP2Q5QJE6 756 aaKnown RBP14.71□□□□□ -0.05
SEMA6D-204ENST00000358066 MRS2Q9HD23 443 aa14.71□□□□□ -0.05
SEMA6D-204ENST00000358066 IRX6P78412 446 aaPredicted RBP14.71□□□□□ -0.06
SEMA6D-204ENST00000358066 CASC1Q6TDU7 716 aa14.71□□□□□ -0.06
SEMA6D-204ENST00000358066 A0A0G2JS52 829 aa14.67□□□□□ -0.06
SEMA6D-204ENST00000358066 NAP1L5Q96NT1 182 aaPredicted RBP14.67□□□□□ -0.06
SEMA6D-204ENST00000358066 ZBTB7CA1YPR0 619 aa14.66□□□□□ -0.06
SEMA6D-204ENST00000358066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms