RNA–Protein interactions for RNA: ENST00000637520.1

ARHGEF9-233, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5 BASIC

Gene ARHGEF9, Length 5,682 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-233ENST00000637520 NISCHQ9Y2I1 1504 aa18.98■□□□□ 0.63
ARHGEF9-233ENST00000637520 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
ARHGEF9-233ENST00000637520 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
ARHGEF9-233ENST00000637520 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
ARHGEF9-233ENST00000637520 FAM9AQ8IZU1 332 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF9-233ENST00000637520 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
ARHGEF9-233ENST00000637520 APLP2Q06481 763 aa16.75■□□□□ 0.27
ARHGEF9-233ENST00000637520 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
ARHGEF9-233ENST00000637520 ABCC9O60706 1549 aa16.5■□□□□ 0.23
ARHGEF9-233ENST00000637520 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
ARHGEF9-233ENST00000637520 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
ARHGEF9-233ENST00000637520 CCER1Q8TC90 406 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF9-233ENST00000637520 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
ARHGEF9-233ENST00000637520 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.17
ARHGEF9-233ENST00000637520 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF9-233ENST00000637520 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF9-233ENST00000637520 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.15
ARHGEF9-233ENST00000637520 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
ARHGEF9-233ENST00000637520 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
ARHGEF9-233ENST00000637520 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF9-233ENST00000637520 ZEB1P37275 1124 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF9-233ENST00000637520 NEFLP07196 543 aa15.78■□□□□ 0.12
ARHGEF9-233ENST00000637520 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
ARHGEF9-233ENST00000637520 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
ARHGEF9-233ENST00000637520 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
ARHGEF9-233ENST00000637520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
ARHGEF9-233ENST00000637520 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
ARHGEF9-233ENST00000637520 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
ARHGEF9-233ENST00000637520 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
ARHGEF9-233ENST00000637520 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
ARHGEF9-233ENST00000637520 NACADO15069 1562 aa15.48■□□□□ 0.07
ARHGEF9-233ENST00000637520 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
ARHGEF9-233ENST00000637520 FBLN2P98095 1184 aa15.4■□□□□ 0.06
ARHGEF9-233ENST00000637520 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
ARHGEF9-233ENST00000637520 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
ARHGEF9-233ENST00000637520 PPARGC1BQ86YN6 1023 aaKnown RBP15.31■□□□□ 0.04
ARHGEF9-233ENST00000637520 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
ARHGEF9-233ENST00000637520 ITGAEP38570 1179 aa15.3■□□□□ 0.04
ARHGEF9-233ENST00000637520 MYT1Q01538 1121 aa15.22■□□□□ 0.03
ARHGEF9-233ENST00000637520 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF9-233ENST00000637520 DCAF1Q9Y4B6 1507 aa15.18■□□□□ 0.02
ARHGEF9-233ENST00000637520 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
ARHGEF9-233ENST00000637520 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF9-233ENST00000637520 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
ARHGEF9-233ENST00000637520 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
ARHGEF9-233ENST00000637520 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
ARHGEF9-233ENST00000637520 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ 0
ARHGEF9-233ENST00000637520 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
ARHGEF9-233ENST00000637520 NPM1P06748 294 aaKnown RBP eCLIP15.02□□□□□ -0.01
ARHGEF9-233ENST00000637520 P3H3Q8IVL6 736 aa15□□□□□ -0.01
ARHGEF9-233ENST00000637520 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF9-233ENST00000637520 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF9-233ENST00000637520 TRIM52Q96A61 297 aa14.97□□□□□ -0.01
ARHGEF9-233ENST00000637520 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
ARHGEF9-233ENST00000637520 CHMP7Q8WUX9 453 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF9-233ENST00000637520 RTL5Q5HYW3 569 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF9-233ENST00000637520 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
ARHGEF9-233ENST00000637520 ARID3CA6NKF2 412 aa14.9□□□□□ -0.02
ARHGEF9-233ENST00000637520 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
ARHGEF9-233ENST00000637520 BCANQ96GW7 911 aa14.88□□□□□ -0.03
ARHGEF9-233ENST00000637520 NEFMP07197 916 aa14.87□□□□□ -0.03
ARHGEF9-233ENST00000637520 HRCP23327 699 aa14.85□□□□□ -0.03
ARHGEF9-233ENST00000637520 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
ARHGEF9-233ENST00000637520 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
ARHGEF9-233ENST00000637520 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
ARHGEF9-233ENST00000637520 ESF1Q9H501 851 aaKnown RBP14.79□□□□□ -0.04
ARHGEF9-233ENST00000637520 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.05
ARHGEF9-233ENST00000637520 ZNF326Q5BKZ1 582 aaKnown RBP14.77□□□□□ -0.05
ARHGEF9-233ENST00000637520 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
ARHGEF9-233ENST00000637520 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
ARHGEF9-233ENST00000637520 EEA1Q15075 1411 aa14.73□□□□□ -0.05
ARHGEF9-233ENST00000637520 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
ARHGEF9-233ENST00000637520 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
ARHGEF9-233ENST00000637520 PDS5BQ9NTI5 1447 aa14.69□□□□□ -0.06
ARHGEF9-233ENST00000637520 ANP32CO43423 234 aa14.68□□□□□ -0.06
ARHGEF9-233ENST00000637520 DIEXFQ68CQ4 756 aaKnown RBP14.62□□□□□ -0.07
ARHGEF9-233ENST00000637520 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
ARHGEF9-233ENST00000637520 MTUS2Q5JR59 1369 aa14.61□□□□□ -0.07
ARHGEF9-233ENST00000637520 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
ARHGEF9-233ENST00000637520 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
ARHGEF9-233ENST00000637520 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
ARHGEF9-233ENST00000637520 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
ARHGEF9-233ENST00000637520 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
ARHGEF9-233ENST00000637520 CLIP1P30622 1438 aa14.57□□□□□ -0.08
ARHGEF9-233ENST00000637520 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
ARHGEF9-233ENST00000637520 KCNH8Q96L42 1107 aa14.53□□□□□ -0.08
ARHGEF9-233ENST00000637520 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.09
ARHGEF9-233ENST00000637520 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.09
ARHGEF9-233ENST00000637520 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
ARHGEF9-233ENST00000637520 CEP164Q9UPV0 1460 aa14.49□□□□□ -0.09
ARHGEF9-233ENST00000637520 CUX2O14529 1486 aa14.49□□□□□ -0.09
ARHGEF9-233ENST00000637520 CHGAP10645 457 aaKnown RBP14.49□□□□□ -0.09
ARHGEF9-233ENST00000637520 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
ARHGEF9-233ENST00000637520 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.09
ARHGEF9-233ENST00000637520 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
ARHGEF9-233ENST00000637520 CHIC2Q9UKJ5 165 aa14.44□□□□□ -0.1
ARHGEF9-233ENST00000637520 SOGA1O94964 1423 aa14.44□□□□□ -0.1
ARHGEF9-233ENST00000637520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
ARHGEF9-233ENST00000637520 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
ARHGEF9-233ENST00000637520 TNIKQ9UKE5 1360 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms