RNA–Protein interactions for RNA: ENST00000512241.1

LINC02504-201, Transcript of long intergenic non-protein coding RNA 2504, humanhuman

TSL 1 (best) BASIC

Gene LINC02504, Length 4,949 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02504-201ENST00000512241 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
LINC02504-201ENST00000512241 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
LINC02504-201ENST00000512241 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
LINC02504-201ENST00000512241 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
LINC02504-201ENST00000512241 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
LINC02504-201ENST00000512241 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
LINC02504-201ENST00000512241 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
LINC02504-201ENST00000512241 TTBK1Q5TCY1 1321 aaPredicted RBP16.28■□□□□ 0.2
LINC02504-201ENST00000512241 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
LINC02504-201ENST00000512241 APLP2Q06481 763 aa16.01■□□□□ 0.15
LINC02504-201ENST00000512241 RANGAP1P46060 587 aaPredicted RBP15.98■□□□□ 0.15
LINC02504-201ENST00000512241 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
LINC02504-201ENST00000512241 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
LINC02504-201ENST00000512241 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
LINC02504-201ENST00000512241 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
LINC02504-201ENST00000512241 ZEB1P37275 1124 aaPredicted RBP15.79■□□□□ 0.12
LINC02504-201ENST00000512241 HRCP23327 699 aa15.76■□□□□ 0.11
LINC02504-201ENST00000512241 UBTFP17480 764 aaKnown RBP15.75■□□□□ 0.11
LINC02504-201ENST00000512241 PELP1Q8IZL8 1130 aaKnown RBP15.72■□□□□ 0.11
LINC02504-201ENST00000512241 TRIM26Q12899 539 aaPredicted RBP15.68■□□□□ 0.1
LINC02504-201ENST00000512241 CENPBP07199 599 aaPredicted RBP15.67■□□□□ 0.1
LINC02504-201ENST00000512241 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
LINC02504-201ENST00000512241 ATP1B4Q9UN42 357 aaPredicted RBP15.6■□□□□ 0.09
LINC02504-201ENST00000512241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
LINC02504-201ENST00000512241 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
LINC02504-201ENST00000512241 ITGAEP38570 1179 aa15.33■□□□□ 0.05
LINC02504-201ENST00000512241 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
LINC02504-201ENST00000512241 NEFLP07196 543 aa15.16■□□□□ 0.02
LINC02504-201ENST00000512241 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
LINC02504-201ENST00000512241 ABCC9O60706 1549 aa15.1■□□□□ 0.01
LINC02504-201ENST00000512241 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0.01
LINC02504-201ENST00000512241 CNGB1Q14028 1251 aaPredicted RBP15.02□□□□□ -0.01
LINC02504-201ENST00000512241 POLR3GLQ9BT43 218 aa14.98□□□□□ -0.01
LINC02504-201ENST00000512241 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
LINC02504-201ENST00000512241 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
LINC02504-201ENST00000512241 NEUROD1Q13562 356 aa14.84□□□□□ -0.03
LINC02504-201ENST00000512241 ZCCHC6Q5VYS8 1495 aaKnown RBP14.83□□□□□ -0.04
LINC02504-201ENST00000512241 MYT1Q01538 1121 aa14.83□□□□□ -0.04
LINC02504-201ENST00000512241 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
LINC02504-201ENST00000512241 BCANQ96GW7 911 aa14.78□□□□□ -0.04
LINC02504-201ENST00000512241 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
LINC02504-201ENST00000512241 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
LINC02504-201ENST00000512241 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
LINC02504-201ENST00000512241 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
LINC02504-201ENST00000512241 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
LINC02504-201ENST00000512241 MYT1LQ9UL68 1186 aa14.69□□□□□ -0.06
LINC02504-201ENST00000512241 P3H3Q8IVL6 736 aa14.68□□□□□ -0.06
LINC02504-201ENST00000512241 TRIM52Q96A61 297 aa14.68□□□□□ -0.06
LINC02504-201ENST00000512241 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
LINC02504-201ENST00000512241 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
LINC02504-201ENST00000512241 ANP32CO43423 234 aa14.55□□□□□ -0.08
LINC02504-201ENST00000512241 DAXXQ9UER7 740 aaPredicted RBP14.52□□□□□ -0.08
LINC02504-201ENST00000512241 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
LINC02504-201ENST00000512241 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
LINC02504-201ENST00000512241 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
LINC02504-201ENST00000512241 FBLN2P98095 1184 aa14.44□□□□□ -0.1
LINC02504-201ENST00000512241 MIER1Q8N108 512 aa14.41□□□□□ -0.1
LINC02504-201ENST00000512241 DDX10Q13206 875 aaKnown RBP14.41□□□□□ -0.1
LINC02504-201ENST00000512241 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
LINC02504-201ENST00000512241 CLSPNQ9HAW4 1339 aa14.36□□□□□ -0.11
LINC02504-201ENST00000512241 FKBP8Q14318 412 aa14.36□□□□□ -0.11
LINC02504-201ENST00000512241 CDK11AQ9UQ88 783 aaPredicted RBP14.36□□□□□ -0.11
LINC02504-201ENST00000512241 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
LINC02504-201ENST00000512241 HIRIP3Q9BW71 556 aaPredicted RBP14.34□□□□□ -0.11
LINC02504-201ENST00000512241 ZNF777Q9ULD5 760 aaPredicted RBP14.33□□□□□ -0.12
LINC02504-201ENST00000512241 CLIP1P30622 1438 aa14.29□□□□□ -0.12
LINC02504-201ENST00000512241 CEP162Q5TB80 1403 aa14.28□□□□□ -0.12
LINC02504-201ENST00000512241 CHIC2Q9UKJ5 165 aa14.28□□□□□ -0.12
LINC02504-201ENST00000512241 TONSLQ96HA7 1378 aa14.27□□□□□ -0.13
LINC02504-201ENST00000512241 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.13
LINC02504-201ENST00000512241 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
LINC02504-201ENST00000512241 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
LINC02504-201ENST00000512241 IRX6P78412 446 aaPredicted RBP14.18□□□□□ -0.14
LINC02504-201ENST00000512241 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
LINC02504-201ENST00000512241 NPM2Q86SE8 214 aaKnown RBP14.15□□□□□ -0.14
LINC02504-201ENST00000512241 BCL11AQ9H165 835 aa14.14□□□□□ -0.15
LINC02504-201ENST00000512241 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
LINC02504-201ENST00000512241 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
LINC02504-201ENST00000512241 TNIKQ9UKE5 1360 aa14.11□□□□□ -0.15
LINC02504-201ENST00000512241 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
LINC02504-201ENST00000512241 SENP3-EIF4A1A0A087X0R7 540 aa14.09□□□□□ -0.15
LINC02504-201ENST00000512241 MTUS2Q5JR59 1369 aa14.08□□□□□ -0.16
LINC02504-201ENST00000512241 SOGA1O94964 1423 aa14.08□□□□□ -0.16
LINC02504-201ENST00000512241 CANXP27824 592 aaKnown RBP14.07□□□□□ -0.16
LINC02504-201ENST00000512241 EEA1Q15075 1411 aa14.07□□□□□ -0.16
LINC02504-201ENST00000512241 MRS2Q9HD23 443 aa14.07□□□□□ -0.16
LINC02504-201ENST00000512241 ANP32AP39687 249 aaKnown RBP14.06□□□□□ -0.16
LINC02504-201ENST00000512241 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
LINC02504-201ENST00000512241 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
LINC02504-201ENST00000512241 KDM2AQ9Y2K7 1162 aa14.05□□□□□ -0.16
LINC02504-201ENST00000512241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.16
LINC02504-201ENST00000512241 TMC1Q8TDI8 760 aa14.01□□□□□ -0.17
LINC02504-201ENST00000512241 CCDC136Q96JN2 1154 aa13.98□□□□□ -0.17
LINC02504-201ENST00000512241 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
LINC02504-201ENST00000512241 CHGAP10645 457 aaKnown RBP13.97□□□□□ -0.17
LINC02504-201ENST00000512241 NBR1Q14596 966 aa13.96□□□□□ -0.17
LINC02504-201ENST00000512241 NACADO15069 1562 aa13.96□□□□□ -0.17
LINC02504-201ENST00000512241 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
LINC02504-201ENST00000512241 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC02504-201ENST00000512241 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms