Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 HSPE1P14-201ENST00000605812 302 ntBASIC7.14□□□□□ -1.27
LHX6Q9UPM6 AP000560.1-201ENST00000624150 1937 ntBASIC7.14□□□□□ -1.27
LHX6Q9UPM6 AC026336.5-201ENST00000624455 738 ntBASIC7.14□□□□□ -1.27
LHX6Q9UPM6 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX6Q9UPM6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC107081.3-201ENST00000612715 2034 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 LINC02555-201ENST00000563933 1951 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 OSBPL9P4-201ENST00000371707 1800 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 MAPK10-377ENST00000642006 2752 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 Y_RNA.597-201ENST00000410463 100 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 RPL23AP36-201ENST00000413895 458 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 THEM7P-201ENST00000419556 672 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 ELOCP18-201ENST00000434209 337 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC008267.6-201ENST00000441664 139 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC239809.1-201ENST00000450470 217 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 RN7SL393P-201ENST00000463588 296 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 TDGF1P6-201ENST00000463873 448 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC009269.1-202ENST00000484381 469 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 RN7SL868P-201ENST00000485915 303 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 COX6B1P2-201ENST00000489624 230 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AP003396.4-201ENST00000527574 265 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC063949.1-201ENST00000552900 865 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 MIR4273-201ENST00000582824 84 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC007619.2-201ENST00000605743 379 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 uc_338.37-201ENST00000620113 186 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 MIR6823-201ENST00000622118 61 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AC007998.4-201ENST00000612496 2533 ntBASIC7.13□□□□□ -1.27
LHX6Q9UPM6 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.13□□□□□ -1.27
LHX6Q9UPM6 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 GABPAP-201ENST00000419271 1356 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 RNU6-715P-201ENST00000365204 103 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 Y_RNA.541-201ENST00000384640 113 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 Y_RNA.581-201ENST00000391017 97 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 BX842559.1-201ENST00000419615 532 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 GCNT1P5-201ENST00000449274 682 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AP003385.3-201ENST00000472498 287 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC087385.2-201ENST00000477729 498 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC087190.1-201ENST00000484462 480 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC107032.1-201ENST00000485945 480 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC018437.1-201ENST00000492214 406 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC009567.2-201ENST00000502989 349 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LHX6Q9UPM6 OR51K1P-201ENST00000510214 950 ntBASIC7.12□□□□□ -1.27
LHX6Q9UPM6 AC008958.1-201ENST00000511047 682 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms