RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
BDNF-207ENST00000395986 PPARGC1BQ86YN6 1023 aaKnown RBP12.63□□□□□ -0.39
BDNF-207ENST00000395986 HRCP23327 699 aa12.49□□□□□ -0.41
BDNF-207ENST00000395986 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
BDNF-207ENST00000395986 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
BDNF-207ENST00000395986 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
BDNF-207ENST00000395986 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
BDNF-207ENST00000395986 SHROOM4Q9ULL8 1493 aa11.99□□□□□ -0.49
BDNF-207ENST00000395986 MYT1Q01538 1121 aa11.92□□□□□ -0.5
BDNF-207ENST00000395986 GTF3C3Q9Y5Q9 886 aa11.79□□□□□ -0.52
BDNF-207ENST00000395986 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
BDNF-207ENST00000395986 LOC105371045A0A1W2PR82 267 aa11.73□□□□□ -0.53
BDNF-207ENST00000395986 MYO15BQ96JP2 1530 aa11.7□□□□□ -0.54
BDNF-207ENST00000395986 CCDC180Q9P1Z9 1646 aa11.67□□□□□ -0.54
BDNF-207ENST00000395986 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
BDNF-207ENST00000395986 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
BDNF-207ENST00000395986 YTHDC1Q96MU7 727 aaKnown RBP11.64□□□□□ -0.55
BDNF-207ENST00000395986 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
BDNF-207ENST00000395986 TRIM26Q12899 539 aaPredicted RBP11.57□□□□□ -0.56
BDNF-207ENST00000395986 BCL11AQ9H165 835 aa11.53□□□□□ -0.56
BDNF-207ENST00000395986 CENPBP07199 599 aaPredicted RBP11.52□□□□□ -0.57
BDNF-207ENST00000395986 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.57
BDNF-207ENST00000395986 FAM9AQ8IZU1 332 aaPredicted RBP11.46□□□□□ -0.57
BDNF-207ENST00000395986 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
BDNF-207ENST00000395986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.59
BDNF-207ENST00000395986 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
BDNF-207ENST00000395986 TTBK1Q5TCY1 1321 aaPredicted RBP11.37□□□□□ -0.59
BDNF-207ENST00000395986 CCER1Q8TC90 406 aaPredicted RBP11.34□□□□□ -0.59
BDNF-207ENST00000395986 ABCC9O60706 1549 aa11.31□□□□□ -0.6
BDNF-207ENST00000395986 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
BDNF-207ENST00000395986 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
BDNF-207ENST00000395986 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.61
BDNF-207ENST00000395986 ANP32EQ9BTT0 268 aa11.18□□□□□ -0.62
BDNF-207ENST00000395986 BCANQ96GW7 911 aa11.13□□□□□ -0.63
BDNF-207ENST00000395986 MIER1Q8N108 512 aa11.09□□□□□ -0.63
BDNF-207ENST00000395986 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.64
BDNF-207ENST00000395986 ZCCHC6Q5VYS8 1495 aaKnown RBP11.01□□□□□ -0.65
BDNF-207ENST00000395986 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
BDNF-207ENST00000395986 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
BDNF-207ENST00000395986 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
BDNF-207ENST00000395986 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
BDNF-207ENST00000395986 NACADO15069 1562 aa10.91□□□□□ -0.66
BDNF-207ENST00000395986 ITGAEP38570 1179 aa10.89□□□□□ -0.67
BDNF-207ENST00000395986 CCDC136Q96JN2 1154 aa10.89□□□□□ -0.67
BDNF-207ENST00000395986 RB1CC1Q8TDY2 1594 aa10.88□□□□□ -0.67
BDNF-207ENST00000395986 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
BDNF-207ENST00000395986 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
BDNF-207ENST00000395986 FKBP8Q14318 412 aa10.79□□□□□ -0.68
BDNF-207ENST00000395986 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
BDNF-207ENST00000395986 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
BDNF-207ENST00000395986 RBM19Q9Y4C8 960 aaKnown RBP10.77□□□□□ -0.68
BDNF-207ENST00000395986 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.76□□□□□ -0.69
BDNF-207ENST00000395986 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
BDNF-207ENST00000395986 NBR1Q14596 966 aa10.72□□□□□ -0.69
BDNF-207ENST00000395986 KCNH8Q96L42 1107 aa10.71□□□□□ -0.69
BDNF-207ENST00000395986 BICRAQ9NZM4 1560 aa10.71□□□□□ -0.7
BDNF-207ENST00000395986 MSH5O43196 834 aa10.69□□□□□ -0.7
BDNF-207ENST00000395986 DEKP35659 375 aaKnown RBP10.68□□□□□ -0.7
BDNF-207ENST00000395986 SCRIBQ14160 1630 aa10.66□□□□□ -0.7
BDNF-207ENST00000395986 IRX6P78412 446 aaPredicted RBP10.65□□□□□ -0.71
BDNF-207ENST00000395986 NEFLP07196 543 aa10.64□□□□□ -0.71
BDNF-207ENST00000395986 EIF5BO60841 1220 aaKnown RBP10.62□□□□□ -0.71
BDNF-207ENST00000395986 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
BDNF-207ENST00000395986 TRIM52Q96A61 297 aa10.6□□□□□ -0.71
BDNF-207ENST00000395986 APLP2Q06481 763 aa10.58□□□□□ -0.72
BDNF-207ENST00000395986 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
BDNF-207ENST00000395986 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
BDNF-207ENST00000395986 CLSPNQ9HAW4 1339 aa10.49□□□□□ -0.73
BDNF-207ENST00000395986 CDK11AQ9UQ88 783 aaPredicted RBP10.48□□□□□ -0.73
BDNF-207ENST00000395986 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
BDNF-207ENST00000395986 HIRIP3Q9BW71 556 aaPredicted RBP10.47□□□□□ -0.73
BDNF-207ENST00000395986 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
BDNF-207ENST00000395986 RTL5Q5HYW3 569 aaPredicted RBP10.42□□□□□ -0.74
BDNF-207ENST00000395986 DNAJC5BQ9UF47 199 aa10.41□□□□□ -0.74
BDNF-207ENST00000395986 SLC24A1O60721 1099 aa10.41□□□□□ -0.74
BDNF-207ENST00000395986 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
BDNF-207ENST00000395986 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
BDNF-207ENST00000395986 UBE2Q2Q8WVN8 375 aa10.34□□□□□ -0.75
BDNF-207ENST00000395986 B4GALNT3Q6L9W6 998 aa10.34□□□□□ -0.75
BDNF-207ENST00000395986 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
BDNF-207ENST00000395986 SENP3-EIF4A1A0A087X0R7 540 aa10.33□□□□□ -0.76
BDNF-207ENST00000395986 EIF4G1Q04637 1599 aaKnown RBP10.33□□□□□ -0.76
BDNF-207ENST00000395986 CNGB1Q14028 1251 aaPredicted RBP10.33□□□□□ -0.76
BDNF-207ENST00000395986 NOP58Q9Y2X3 529 aaKnown RBP10.33□□□□□ -0.76
BDNF-207ENST00000395986 CECR2Q9BXF3 1484 aa10.31□□□□□ -0.76
BDNF-207ENST00000395986 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
BDNF-207ENST00000395986 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
BDNF-207ENST00000395986 PLEKHG5O94827 1062 aa10.31□□□□□ -0.76
BDNF-207ENST00000395986 HNRNPUQ00839 825 aaKnown RBP eCLIP10.29□□□□□ -0.76
BDNF-207ENST00000395986 PKNOX2Q96KN3 472 aa10.29□□□□□ -0.76
BDNF-207ENST00000395986 CC2D2AQ9P2K1 1620 aa10.28□□□□□ -0.76
BDNF-207ENST00000395986 MYT1LQ9UL68 1186 aa10.27□□□□□ -0.76
BDNF-207ENST00000395986 BRPF3Q9ULD4 1205 aa10.25□□□□□ -0.77
BDNF-207ENST00000395986 ZBTB47Q9UFB7 747 aaPredicted RBP10.23□□□□□ -0.77
BDNF-207ENST00000395986 ERICH6BQ5W0A0 696 aa10.23□□□□□ -0.77
BDNF-207ENST00000395986 SIN3AQ96ST3 1273 aa10.23□□□□□ -0.77
BDNF-207ENST00000395986 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
BDNF-207ENST00000395986 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
BDNF-207ENST00000395986 ANP32CO43423 234 aa10.21□□□□□ -0.77
BDNF-207ENST00000395986 NEFMP07197 916 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms