RNA–Protein interactions for RNA: ENST00000563933.1

LINC02555-201, Transcript of long intergenic non-protein coding RNA 2555, humanhuman

BASIC

Gene LINC02555, Length 1,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02555-201ENST00000563933 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
LINC02555-201ENST00000563933 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
LINC02555-201ENST00000563933 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
LINC02555-201ENST00000563933 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
LINC02555-201ENST00000563933 FOXD1Q16676 465 aa13.16□□□□□ -0.3
LINC02555-201ENST00000563933 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
LINC02555-201ENST00000563933 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
LINC02555-201ENST00000563933 ADRA2BP18089 450 aa12.33□□□□□ -0.44
LINC02555-201ENST00000563933 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
LINC02555-201ENST00000563933 MSH5O43196 834 aa12.23□□□□□ -0.45
LINC02555-201ENST00000563933 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
LINC02555-201ENST00000563933 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
LINC02555-201ENST00000563933 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
LINC02555-201ENST00000563933 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
LINC02555-201ENST00000563933 PPP4R3CPQ6ZMV5 832 aa11.07□□□□□ -0.64
LINC02555-201ENST00000563933 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
LINC02555-201ENST00000563933 HOXD11P31277 338 aaPredicted RBP10.79□□□□□ -0.68
LINC02555-201ENST00000563933 DCAF8L1A6NGE4 600 aa10.72□□□□□ -0.69
LINC02555-201ENST00000563933 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
LINC02555-201ENST00000563933 NCBP3Q53F19 620 aaKnown RBP10.6□□□□□ -0.71
LINC02555-201ENST00000563933 NPM3O75607 178 aaKnown RBP10.51□□□□□ -0.73
LINC02555-201ENST00000563933 CACNB1Q02641 598 aaPredicted RBP10.5□□□□□ -0.73
LINC02555-201ENST00000563933 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
LINC02555-201ENST00000563933 KCNA4P22459 653 aa10.36□□□□□ -0.75
LINC02555-201ENST00000563933 DNAJC5BQ9UF47 199 aa10.36□□□□□ -0.75
LINC02555-201ENST00000563933 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
LINC02555-201ENST00000563933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC02555-201ENST00000563933 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
LINC02555-201ENST00000563933 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
LINC02555-201ENST00000563933 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
LINC02555-201ENST00000563933 CAPN15O75808 1086 aa9.9□□□□□ -0.83
LINC02555-201ENST00000563933 DSG3P32926 999 aa9.84□□□□□ -0.83
LINC02555-201ENST00000563933 SLC4A1APQ9BWU0 796 aaKnown RBP9.76□□□□□ -0.85
LINC02555-201ENST00000563933 TRHP20396 242 aaPredicted RBP9.75□□□□□ -0.85
LINC02555-201ENST00000563933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
LINC02555-201ENST00000563933 HNRNPUL2Q1KMD3 747 aaKnown RBP9.74□□□□□ -0.85
LINC02555-201ENST00000563933 APLP2Q06481 763 aa9.72□□□□□ -0.85
LINC02555-201ENST00000563933 SAMD1Q6SPF0 538 aaPredicted RBP9.71□□□□□ -0.86
LINC02555-201ENST00000563933 ABCB7O75027 752 aa9.7□□□□□ -0.86
LINC02555-201ENST00000563933 ZNF219Q9P2Y4 722 aaPredicted RBP9.69□□□□□ -0.86
LINC02555-201ENST00000563933 MYCNP04198 464 aaPredicted RBP9.68□□□□□ -0.86
LINC02555-201ENST00000563933 FOXD4L1Q9NU39 408 aa9.61□□□□□ -0.87
LINC02555-201ENST00000563933 ZBTB22O15209 634 aa9.55□□□□□ -0.88
LINC02555-201ENST00000563933 ATF5Q9Y2D1 282 aaPredicted RBP9.54□□□□□ -0.88
LINC02555-201ENST00000563933 POLA2Q14181 598 aa9.51□□□□□ -0.89
LINC02555-201ENST00000563933 POTEHQ6S545 545 aa9.33□□□□□ -0.92
LINC02555-201ENST00000563933 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
LINC02555-201ENST00000563933 ATXN8OSP0DMR3 200 aa9.3□□□□□ -0.92
LINC02555-201ENST00000563933 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
LINC02555-201ENST00000563933 OSCARQ8IYS5 282 aa9.2□□□□□ -0.94
LINC02555-201ENST00000563933 AKT1S1Q96B36 256 aa9.15□□□□□ -0.95
LINC02555-201ENST00000563933 CHRDL2Q6WN34 429 aa9.14□□□□□ -0.95
LINC02555-201ENST00000563933 CSRNP3Q8WYN3 585 aa9.13□□□□□ -0.95
LINC02555-201ENST00000563933 REM2Q8IYK8 340 aaPredicted RBP9.09□□□□□ -0.95
LINC02555-201ENST00000563933 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
LINC02555-201ENST00000563933 FBLN2P98095 1184 aa9.06□□□□□ -0.96
LINC02555-201ENST00000563933 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
LINC02555-201ENST00000563933 PITPNM1O00562 1244 aa9□□□□□ -0.97
LINC02555-201ENST00000563933 SPDYE2BA6NHP3 402 aa8.99□□□□□ -0.97
LINC02555-201ENST00000563933 SPDYE6P0CI01 402 aa8.99□□□□□ -0.97
LINC02555-201ENST00000563933 SPDYE2Q495Y8 402 aa8.99□□□□□ -0.97
LINC02555-201ENST00000563933 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.98
LINC02555-201ENST00000563933 ZNF692Q9BU19 519 aaPredicted RBP8.92□□□□□ -0.98
LINC02555-201ENST00000563933 FXR2P51116 673 aaKnown RBP eCLIP8.9□□□□□ -0.98
LINC02555-201ENST00000563933 SSUH2Q9Y2M2 353 aa8.9□□□□□ -0.98
LINC02555-201ENST00000563933 CLEC11AQ9Y240 323 aa8.84□□□□□ -0.99
LINC02555-201ENST00000563933 SPDYE1Q8NFV5 336 aaPredicted RBP8.82□□□□□ -1
LINC02555-201ENST00000563933 PABPN1Q86U42 306 aaKnown RBP eCLIP8.8□□□□□ -1
LINC02555-201ENST00000563933 HAX1O00165 279 aa8.77□□□□□ -1.01
LINC02555-201ENST00000563933 SP7Q8TDD2 431 aaPredicted RBP8.77□□□□□ -1.01
LINC02555-201ENST00000563933 PRKAR2AP13861 404 aaKnown RBP8.75□□□□□ -1.01
LINC02555-201ENST00000563933 EVX2Q03828 476 aa8.73□□□□□ -1.01
LINC02555-201ENST00000563933 CHADLQ6NUI6 762 aa8.7□□□□□ -1.02
LINC02555-201ENST00000563933 PRR29P0C7W0 189 aa8.69□□□□□ -1.02
LINC02555-201ENST00000563933 SPDYE4A6NLX3 237 aa8.64□□□□□ -1.03
LINC02555-201ENST00000563933 C19orf67A6NJJ6 358 aa8.62□□□□□ -1.03
LINC02555-201ENST00000563933 FARP1Q9Y4F1 1045 aaPredicted RBP8.55□□□□□ -1.04
LINC02555-201ENST00000563933 CREBZFQ9NS37 354 aa8.52□□□□□ -1.05
LINC02555-201ENST00000563933 STAG3Q9UJ98 1225 aa8.52□□□□□ -1.05
LINC02555-201ENST00000563933 GABBR2O75899 941 aa8.48□□□□□ -1.05
LINC02555-201ENST00000563933 CD44P16070 742 aaKnown RBP8.48□□□□□ -1.05
LINC02555-201ENST00000563933 PROM2Q8N271 834 aa8.44□□□□□ -1.06
LINC02555-201ENST00000563933 MNX1P50219 401 aaPredicted RBP8.38□□□□□ -1.07
LINC02555-201ENST00000563933 ZRANB1Q9UGI0 708 aa8.37□□□□□ -1.07
LINC02555-201ENST00000563933 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
LINC02555-201ENST00000563933 ZNF579Q8NAF0 562 aaKnown RBP8.34□□□□□ -1.07
LINC02555-201ENST00000563933 NPM1P06748 294 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC02555-201ENST00000563933 CLCN6P51797 869 aa8.29□□□□□ -1.08
LINC02555-201ENST00000563933 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
LINC02555-201ENST00000563933 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
LINC02555-201ENST00000563933 FKBP8Q14318 412 aa8.26□□□□□ -1.09
LINC02555-201ENST00000563933 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
LINC02555-201ENST00000563933 LHX8Q68G74 356 aa8.23□□□□□ -1.09
LINC02555-201ENST00000563933 MIER1Q8N108 512 aa8.23□□□□□ -1.09
LINC02555-201ENST00000563933 DCBLD2Q96PD2 775 aa8.23□□□□□ -1.09
LINC02555-201ENST00000563933 TSPYL2Q9H2G4 693 aaPredicted RBP8.21□□□□□ -1.1
LINC02555-201ENST00000563933 MS4A3Q96HJ5 214 aa8.16□□□□□ -1.1
LINC02555-201ENST00000563933 PLEKHG5O94827 1062 aa8.15□□□□□ -1.1
LINC02555-201ENST00000563933 RASEFQ8IZ41 740 aa8.15□□□□□ -1.1
LINC02555-201ENST00000563933 PLCD3Q8N3E9 789 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms