Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP4S1Q9Y587 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 FP475955.4-201ENST00000623131 1990 ntBASIC18.32■□□□□ 0.52
AP4S1Q9Y587 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 SLC7A5P1-201ENST00000568957 537 ntBASIC18.32■□□□□ 0.52
AP4S1Q9Y587 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
AP4S1Q9Y587 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 AP001330.3-201ENST00000520123 633 ntBASIC18.31■□□□□ 0.52
AP4S1Q9Y587 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP4S1Q9Y587 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP4S1Q9Y587 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.29■□□□□ 0.52
AP4S1Q9Y587 CYP21A1P-202ENST00000354927 1481 ntBASIC18.29■□□□□ 0.52
AP4S1Q9Y587 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms