Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 MIR4758-201ENST00000577688 71 ntBASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 FZD10-202ENST00000539839 3282 ntBASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HHLA3Q9XRX5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 KRT8P17-201ENST00000453110 1448 ntBASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 AL133373.2-201ENST00000623187 2828 ntBASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 AC018470.1-201ENST00000624790 3129 ntBASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 LINC01465-201ENST00000408887 1940 ntBASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 KRT8P20-201ENST00000423953 1409 ntBASIC14.15□□□□□ -0.14
HHLA3Q9XRX5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.15□□□□□ -0.15
HHLA3Q9XRX5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
HHLA3Q9XRX5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.15□□□□□ -0.15
HHLA3Q9XRX5 AC120498.9-201ENST00000339021 3867 ntBASIC14.15□□□□□ -0.15
HHLA3Q9XRX5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 AC092118.2-201ENST00000613495 667 ntBASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 AL109923.1-201ENST00000618799 583 ntBASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HHLA3Q9XRX5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HHLA3Q9XRX5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms