Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 AP006587.1-201ENST00000534129 1502 ntBASIC8.01□□□□□ -1.13
MACF1Q9UPN3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 AC093028.1-201ENST00000622998 982 ntBASIC8.01□□□□□ -1.13
MACF1Q9UPN3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 OR8S1-201ENST00000310194 1080 ntBASIC8.01□□□□□ -1.13
MACF1Q9UPN3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
MACF1Q9UPN3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC8□□□□□ -1.13
MACF1Q9UPN3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC8□□□□□ -1.13
MACF1Q9UPN3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 AC068473.5-201ENST00000616428 2072 ntBASIC8□□□□□ -1.13
MACF1Q9UPN3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC8□□□□□ -1.13
MACF1Q9UPN3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC8□□□□□ -1.13
MACF1Q9UPN3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC8□□□□□ -1.13
MACF1Q9UPN3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
MACF1Q9UPN3 AL355877.3-201ENST00000622820 899 ntBASIC8□□□□□ -1.13
MACF1Q9UPN3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC8□□□□□ -1.13
MACF1Q9UPN3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 AC002347.1-201ENST00000569543 541 ntBASIC8□□□□□ -1.13
MACF1Q9UPN3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 Z83851.2-201ENST00000609564 659 ntBASIC8□□□□□ -1.13
MACF1Q9UPN3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC8□□□□□ -1.13
MACF1Q9UPN3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC8□□□□□ -1.13
MACF1Q9UPN3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC8□□□□□ -1.13
MACF1Q9UPN3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
MACF1Q9UPN3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms